Pre_GI Gene

Some Help

Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:368942 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3689423699941053outer membrane pore protein e eicnmpabQuickGO ontologyBLASTP
3702763713791104gamma-glutamyl kinaseQuickGO ontologyBLASTP
3713913726411251gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
37275737283276tRNA-ThrQuickGO ontologyBLASTP
3728473740101164IntQuickGO ontologyBLASTP
374240374875636EaC proteinQuickGO ontologyBLASTP
3749463761211176Eaa proteinQuickGO ontologyBLASTP
376118376579462hypothetical protein
376576377097522hypothetical proteinBLASTP
377094377327234hypothetical proteinBLASTP
377324377701378Eae proteinQuickGO ontologyBLASTP
378809379357549EndodeoxyribonucleaseQuickGO ontologyBLASTP
379366379872507ssDNA-binding protein controls activity of RecBCD nucleaseQuickGO ontologyBLASTP
379873380580708Orf-235-like proteinQuickGO ontologyBLASTP
380710380898189kil protein inhibitor of host septation in Enterobacteria phage P22QuickGO ontologyBLASTP
380879381052174C3-like proteinQuickGO ontologyBLASTP
381244381444201hypothetical proteinBLASTP
38151338177025843L-like proteinQuickGO ontologyBLASTP
382199382501303antitermination proteinQuickGO ontologyBLASTP
383603383818216regulatory protein cro AntirepressorQuickGO ontologyBLASTP
384386385234849replication protein OQuickGO ontologyBLASTP
3853423872221881hypothetical proteinBLASTP
388012388884873Nin-like proteinQuickGO ontologyBLASTP
388943389278336hypothetical proteinBLASTP
389632390027396RusQuickGO ontologyBLASTP
390208390387180NinZQuickGO ontologyBLASTP
390384390902519gp23-like proteinQuickGO ontologyBLASTP
39104539112076tRNA-ThrQuickGO ontology
391363391686324holin-like proteinQuickGO ontologyBLASTP
391561391683123hypothetical protein
391670392146477lysinQuickGO ontologyBLASTP
392143392580438Rz lysis proteinQuickGO ontologyBLASTP
392342392527186TPA unknownQuickGO ontologyBLASTP
392786393274489hypothetical proteinBLASTP