Pre_GI Gene

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Host: NC_011184 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011184:2421687 Vibrio fischeri MJ11 chromosome I, complete sequence

Host Lineage: Aliivibrio fischeri; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from a pinecone fish, Monocentris japonica, light-emitting organs in Japan. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This organism is found in marine environments and was originally named by Bernard Fischer during a sea voyage in the 1800s. It is a symbiont in fish and squids and is responsible for light generation in those organisms, which use it as a defense mechanism to avoid predators.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
242168724228321146carbohydrate diacid regulatorQuickGO ontologyBLASTP
242296024242251266gluconate permeaseQuickGO ontologyBLASTP
242423824253681131glycerate kinaseQuickGO ontologyBLASTP
242543624280242589aconitate hydratase 2QuickGO ontologyBLASTP
242824424305142271serine proteaseQuickGO ontologyBLASTP
2431239243131577tRNA-AspQuickGO ontologyBLASTP
243138524315001165S ribosomal RNAQuickGO ontologyBLASTP
2434873243494876tRNA-AlaQuickGO ontologyBLASTP
2434985243506177tRNA-IleQuickGO ontologyBLASTP
243733324389581626methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
2439098243917376tRNA-AsnQuickGO ontology
2439203243927876tRNA-ThrQuickGO ontology
2439331243940676tRNA-PheQuickGO ontologyBLASTP
243964324420152373penicillin-binding protein 1BQuickGO ontologyBLASTP
244204024445052466ATP-dependent helicase HrpBQuickGO ontologyBLASTP
24445652445272708sugar fermentation stimulation proteinQuickGO ontologyBLASTP
24454382445887450RNA polymerase-binding protein DksAQuickGO ontologyBLASTP
24459522446845894glutamyl-tRNA synthetase-related proteinQuickGO ontologyBLASTP
244686624482931428polyA polymerase PAP Plasmid copy number proteinQuickGO ontologyBLASTP
244829024487754862-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseQuickGO ontologyBLASTP