Pre_GI: OUP Neighbours

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Query: NC_010999:2483000 Lactobacillus casei, complete genome

D: 27.2718

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei BL23 is a probiotic strain that was originally isolated from cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

Number of Neighbours: 158




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005966:159232*Acinetobacter sp. ADP1, complete genome77.3315 %Subject ←→ Query21.8081
NC_015428:21724Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.3186 %Subject ←→ Query22.2854
NC_015428:193817Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.3664 %Subject ←→ Query22.7687
NC_015697:116000*Lactobacillus reuteri SD2112 chromosome, complete genome76.2898 %Subject ←→ Query22.793
NC_005966:3334864Acinetobacter sp. ADP1, complete genome75.144 %Subject ←→ Query22.8133
NC_015428:2019500*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.1183 %Subject ←→ Query23.2156
NC_015697:256000*Lactobacillus reuteri SD2112 chromosome, complete genome75.0429 %Subject ←→ Query23.2612
NC_015602:1143038Lactobacillus kefiranofaciens ZW3 chromosome, complete genome75.5515 %Subject ←→ Query23.4253
NC_014334:1039248Lactobacillus casei str. Zhang chromosome, complete genome82.4969 %Subject ←→ Query24.0151
NC_014334:2696000Lactobacillus casei str. Zhang chromosome, complete genome83.1801 %Subject ←→ Query25.2128
NC_014334:2307950Lactobacillus casei str. Zhang chromosome, complete genome81.4614 %Subject ←→ Query25.5593
NC_015637:669593Vibrio anguillarum 775 chromosome chromosome II, complete sequence75.0919 %Subject ←→ Query25.6019
NC_010999:349252Lactobacillus casei, complete genome78.5233 %Subject ←→ Query25.611
NC_010080:1885677Lactobacillus helveticus DPC 4571, complete genome78.7776 %Subject ←→ Query25.9241
NC_010080:1911932Lactobacillus helveticus DPC 4571, complete genome79.1881 %Subject ←→ Query25.9336
NC_014334:369974Lactobacillus casei str. Zhang chromosome, complete genome80.5116 %Subject ←→ Query26.4531
NC_010999:2059738Lactobacillus casei, complete genome79.0686 %Subject ←→ Query26.5655
NC_012913:280506Aggregatibacter aphrophilus NJ8700, complete genome75.3554 %Subject ←→ Query26.6691
NC_015428:1483768Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.6771 %Subject ←→ Query26.7814
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome76.826 %Subject ←→ Query26.7854
NC_008526:2373190Lactobacillus casei ATCC 334, complete genome82.3284 %Subject ←→ Query26.8543
NC_015222:1127675*Nitrosomonas sp. AL212 chromosome, complete genome75.2665 %Subject ←→ Query26.9638
NC_015731:1731896Nitrosomonas sp. Is79A3 chromosome, complete genome75.4228 %Subject ←→ Query27.058
NC_010999:2516000Lactobacillus casei, complete genome84.1299 %Subject ←→ Query27.1158
NC_008526:1973500Lactobacillus casei ATCC 334, complete genome81.2347 %Subject ←→ Query27.286
NC_015731:402280Nitrosomonas sp. Is79A3 chromosome, complete genome75.7721 %Subject ←→ Query27.2921
NC_015222:523915Nitrosomonas sp. AL212 chromosome, complete genome75.9498 %Subject ←→ Query27.4514
NC_015731:2400526*Nitrosomonas sp. Is79A3 chromosome, complete genome77.7604 %Subject ←→ Query27.4684
NC_015224:2618192*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0521 %Subject ←→ Query27.59
NC_015222:1492500Nitrosomonas sp. AL212 chromosome, complete genome77.6072 %Subject ←→ Query27.6569
NC_007520:903799*Thiomicrospira crunogena XCL-2, complete genome75.5331 %Subject ←→ Query27.7177
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome77.356 %Subject ←→ Query27.7237
NC_015222:1905194*Nitrosomonas sp. AL212 chromosome, complete genome76.5901 %Subject ←→ Query27.742
NC_005140:660305Vibrio vulnificus YJ016 chromosome II, complete sequence77.1048 %Subject ←→ Query27.8453
NC_015975:789312Lactobacillus ruminis ATCC 27782 chromosome, complete genome78.1311 %Subject ←→ Query27.8749
NC_008525:561000Pediococcus pentosaceus ATCC 25745, complete genome75.8303 %Subject ←→ Query28.0034
NC_012984:3077004Lactobacillus plantarum JDM1, complete genome77.2978 %Subject ←→ Query28.2101
NC_010999:2450974*Lactobacillus casei, complete genome83.4375 %Subject ←→ Query28.2344
NC_015731:1381737Nitrosomonas sp. Is79A3 chromosome, complete genome77.9534 %Subject ←→ Query28.2344
NC_009052:4335754Shewanella baltica OS155, complete genome75.2574 %Subject ←→ Query28.274
NC_004460:81687Vibrio vulnificus CMCP6 chromosome II, complete sequence76.9363 %Subject ←→ Query28.2861
NC_013199:1150000Lactobacillus rhamnosus Lc 705, complete genome83.4896 %Subject ←→ Query28.4351
NC_008150:4561633*Yersinia pestis Antiqua, complete genome76.0294 %Subject ←→ Query28.4594
NC_015224:4101939*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.3064 %Subject ←→ Query28.505
NC_013895:1282566*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.7812 %Subject ←→ Query28.6033
NC_010465:3958766Yersinia pseudotuberculosis YPIII, complete genome75.9681 %Subject ←→ Query28.7816
NC_015731:2460248*Nitrosomonas sp. Is79A3 chromosome, complete genome75.5699 %Subject ←→ Query28.8132
NC_013895:1086500*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.769 %Subject ←→ Query28.8667
NC_009052:2683447*Shewanella baltica OS155, complete genome76.7402 %Subject ←→ Query28.9093
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome83.9706 %Subject ←→ Query28.9383
NC_015660:3467579*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.5699 %Subject ←→ Query28.9622
NC_009052:5089963Shewanella baltica OS155, complete genome76.8964 %Subject ←→ Query29.0126
NC_015222:1607757Nitrosomonas sp. AL212 chromosome, complete genome77.6501 %Subject ←→ Query29.1095
NC_004088:4116676Yersinia pestis KIM, complete genome76.1458 %Subject ←→ Query29.2173
NC_010159:2440947Yersinia pestis Angola, complete genome76.5349 %Subject ←→ Query29.2315
NC_010999:1245239Lactobacillus casei, complete genome79.0043 %Subject ←→ Query29.2811
NC_009783:1956000Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence75.1471 %Subject ←→ Query29.2954
NC_003143:483395*Yersinia pestis CO92, complete genome75.9988 %Subject ←→ Query29.2984
NC_014334:37040Lactobacillus casei str. Zhang chromosome, complete genome83.2476 %Subject ←→ Query29.347
NC_013199:2426686Lactobacillus rhamnosus Lc 705, complete genome82.8891 %Subject ←→ Query29.5122
NC_013199:1407742*Lactobacillus rhamnosus Lc 705, complete genome80.6373 %Subject ←→ Query29.5477
NC_009997:2967521*Shewanella baltica OS195, complete genome75.5116 %Subject ←→ Query29.575
NC_013199:392450*Lactobacillus rhamnosus Lc 705, complete genome79.758 %Subject ←→ Query29.6644
NC_015633:2565753*Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.098 %Subject ←→ Query29.7101
NC_011026:1284966*Chloroherpeton thalassium ATCC 35110, complete genome76.2316 %Subject ←→ Query29.7452
NC_015731:2148517*Nitrosomonas sp. Is79A3 chromosome, complete genome75.2114 %Subject ←→ Query29.7647
NC_005810:1976000Yersinia pestis biovar Microtus str. 91001, complete genome75.4534 %Subject ←→ Query29.7909
NC_005139:518760Vibrio vulnificus YJ016 chromosome I, complete sequence75.5055 %Subject ←→ Query29.8091
NC_010999:623489Lactobacillus casei, complete genome78.2782 %Subject ←→ Query29.8391
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome76.8505 %Subject ←→ Query29.8821
NC_013198:2458080Lactobacillus rhamnosus GG, complete genome83.0515 %Subject ←→ Query29.954
NC_004347:718091Shewanella oneidensis MR-1, complete genome76.0876 %Subject ←→ Query30.0041
NC_008149:402599*Yersinia pestis Nepal516, complete genome76.1029 %Subject ←→ Query30.0082
NC_015731:3077842Nitrosomonas sp. Is79A3 chromosome, complete genome75.4197 %Subject ←→ Query30.0354
NC_009052:2512373Shewanella baltica OS155, complete genome75.6464 %Subject ←→ Query30.0584
NC_004603:1519904Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete75.2788 %Subject ←→ Query30.0705
NC_003143:1880000Yersinia pestis CO92, complete genome75.3615 %Subject ←→ Query30.0766
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome76.4828 %Subject ←→ Query30.0948
NC_009654:91096*Marinomonas sp. MWYL1, complete genome76.0876 %Subject ←→ Query30.2225
NC_008322:2637646*Shewanella sp. MR-7, complete genome76.5809 %Subject ←→ Query30.2286
NC_008526:506263Lactobacillus casei ATCC 334, complete genome75.9467 %Subject ←→ Query30.2894
NC_010410:480518*Acinetobacter baumannii AYE, complete genome75.4504 %Subject ←→ Query30.396
NC_008321:2569315*Shewanella sp. MR-4, complete genome75.867 %Subject ←→ Query30.4034
NC_011852:211314Haemophilus parasuis SH0165, complete genome75.0521 %Subject ←→ Query30.4292
NC_003910:4234000Colwellia psychrerythraea 34H, complete genome75.0643 %Subject ←→ Query30.5236
NC_008526:565902Lactobacillus casei ATCC 334, complete genome76.4767 %Subject ←→ Query30.5707
NC_013199:2386924Lactobacillus rhamnosus Lc 705, complete genome84.424 %Subject ←→ Query30.5957
NC_010159:809663Yersinia pestis Angola, complete genome75.8609 %Subject ←→ Query30.5995
NC_013198:1030970*Lactobacillus rhamnosus GG, complete genome81.731 %Subject ←→ Query30.8386
NC_010999:561914Lactobacillus casei, complete genome78.9798 %Subject ←→ Query30.939
NC_004567:343500Lactobacillus plantarum WCFS1, complete genome75.7414 %Subject ←→ Query30.9556
NC_007576:1564739*Lactobacillus sakei subsp. sakei 23K, complete genome78.22 %Subject ←→ Query31.0118
NC_015214:1458480Lactobacillus acidophilus 30SC chromosome, complete genome76.7616 %Subject ←→ Query31.0242
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome82.4877 %Subject ←→ Query31.056
NC_008322:2077628*Shewanella sp. MR-7, complete genome77.5613 %Subject ←→ Query31.0943
NC_004347:4541742Shewanella oneidensis MR-1, complete genome77.0006 %Subject ←→ Query31.2642
NC_015428:1668465*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome77.0527 %Subject ←→ Query31.3716
NC_010999:1381497*Lactobacillus casei, complete genome81.4828 %Subject ←→ Query31.3851
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome75.1838 %Subject ←→ Query31.4418
NC_013198:36829Lactobacillus rhamnosus GG, complete genome79.3689 %Subject ←→ Query31.5674
NC_009052:1899954Shewanella baltica OS155, complete genome75.9467 %Subject ←→ Query31.5886
NC_015602:1949610Lactobacillus kefiranofaciens ZW3 chromosome, complete genome77.7512 %Subject ←→ Query31.6209
NC_009052:2107692Shewanella baltica OS155, complete genome75.2635 %Subject ←→ Query31.778
NC_015581:771482*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.9528 %Subject ←→ Query31.8014
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome76.8076 %Subject ←→ Query31.8736
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome75.4259 %Subject ←→ Query31.9226
NC_010999:2155714Lactobacillus casei, complete genome80.769 %Subject ←→ Query31.9385
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome81.2377 %Subject ←→ Query31.9404
NC_008322:3585601*Shewanella sp. MR-7, complete genome75.0306 %Subject ←→ Query32.0176
NC_007576:471500*Lactobacillus sakei subsp. sakei 23K, complete genome75.4596 %Subject ←→ Query32.0931
NC_012917:2971702Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.0153 %Subject ←→ Query32.0937
NC_007576:299266*Lactobacillus sakei subsp. sakei 23K, complete genome76.1458 %Subject ←→ Query32.1055
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome75.913 %Subject ←→ Query32.4678
NC_013198:1095591Lactobacillus rhamnosus GG, complete genome79.2433 %Subject ←→ Query32.5093
NC_004459:1Vibrio vulnificus CMCP6 chromosome I, complete sequence76.4185 %Subject ←→ Query32.7196
NC_015581:1791658*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome76.0141 %Subject ←→ Query32.7922
NC_008577:2115440*Shewanella sp. ANA-3 chromosome 1, complete sequence77.1599 %Subject ←→ Query32.8405
NC_013895:605488*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete76.6973 %Subject ←→ Query32.8408
NC_008526:1924761Lactobacillus casei ATCC 334, complete genome75.6127 %Subject ←→ Query32.8703
NC_006155:2893802Yersinia pseudotuberculosis IP 32953, complete genome75.095 %Subject ←→ Query32.886
NC_004088:2366000*Yersinia pestis KIM, complete genome75.0766 %Subject ←→ Query33.0728
NC_005126:2063667Photorhabdus luminescens subsp. laumondii TTO1, complete genome75.1379 %Subject ←→ Query33.1955
NC_002506:298868*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete76.2623 %Subject ←→ Query33.2059
NC_014334:1954333Lactobacillus casei str. Zhang chromosome, complete genome79.6109 %Subject ←→ Query33.3293
NC_015581:680460Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome78.4375 %Subject ←→ Query33.4619
NC_013198:1538792*Lactobacillus rhamnosus GG, complete genome79.1942 %Subject ←→ Query33.5442
NC_011026:2269986*Chloroherpeton thalassium ATCC 35110, complete genome76.9271 %Subject ←→ Query33.5605
NC_012691:1250385Tolumonas auensis DSM 9187, complete genome75.6801 %Subject ←→ Query33.6941
NC_013199:2058857*Lactobacillus rhamnosus Lc 705, complete genome81.0263 %Subject ←→ Query33.7873
NC_013199:845000Lactobacillus rhamnosus Lc 705, complete genome77.163 %Subject ←→ Query33.8589
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome78.8572 %Subject ←→ Query34.0009
NC_002505:1931750Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete75.5484 %Subject ←→ Query34.0291
NC_006155:2461262*Yersinia pseudotuberculosis IP 32953, complete genome75.0827 %Subject ←→ Query34.0957
NC_013166:82986Kangiella koreensis DSM 16069, complete genome77.4142 %Subject ←→ Query34.1481
NC_015731:2950874*Nitrosomonas sp. Is79A3 chromosome, complete genome76.4951 %Subject ←→ Query34.276
NC_008054:201075*Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete75.0705 %Subject ←→ Query34.2781
NC_008322:1186000*Shewanella sp. MR-7, complete genome76.2286 %Subject ←→ Query34.6086
NC_008577:2402165Shewanella sp. ANA-3 chromosome 1, complete sequence75.1593 %Subject ←→ Query34.8689
NC_008321:1993541*Shewanella sp. MR-4, complete genome76.2347 %Subject ←→ Query34.9743
NC_008577:2604281Shewanella sp. ANA-3 chromosome 1, complete sequence75.1991 %Subject ←→ Query34.9877
NC_008322:2983951Shewanella sp. MR-7, complete genome75.7261 %Subject ←→ Query35.0073
NC_013198:2088780*Lactobacillus rhamnosus GG, complete genome81.6544 %Subject ←→ Query35.0489
NC_015224:3225000*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.6054 %Subject ←→ Query35.2572
NC_002505:1892430*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete75.962 %Subject ←→ Query35.2857
NC_015224:1514747Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.3051 %Subject ←→ Query35.661
NC_012691:2097287*Tolumonas auensis DSM 9187, complete genome77.1354 %Subject ←→ Query35.9123
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome75.3707 %Subject ←→ Query36.4447
NC_015224:3587500Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.5423 %Subject ←→ Query36.7592
NC_010610:861194Lactobacillus fermentum IFO 3956, complete genome75.2083 %Subject ←→ Query36.7806
NC_012691:779826*Tolumonas auensis DSM 9187, complete genome76.1397 %Subject ←→ Query36.9103
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.6654 %Subject ←→ Query36.9283
NC_006370:847204Photobacterium profundum SS9 chromosome 1, complete sequence75.3248 %Subject Query37.8101
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome75.6679 %Subject Query38.7541
NC_012691:3126500Tolumonas auensis DSM 9187, complete genome75.2788 %Subject Query40.5946
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome76.7249 %Subject Query42.6158
NC_015214:1853106Lactobacillus acidophilus 30SC chromosome, complete genome76.3817 %Subject Query43.7956
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome76.7862 %Subject Query44.7005
NC_009832:1719149Serratia proteamaculans 568, complete genome75.8058 %Subject Query48.0067