Pre_GI Gene

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Host: NC_007576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007576:471500 Lactobacillus sakei subsp. sakei 23K, complete genome

Host Lineage: Lactobacillus sakei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (23K) was originally isolated from a French sausage. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus sakei is the predominant lactic acid bacteria found on fresh meat. This organism is used as a starter in the production of fermented meat products, and plays a major role in preserving meat products by inhibiting the growth of other bacteria.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
471876472022147Hypothetical small peptideQuickGO ontology
4721534734091257Putative glycosyl transferase group 1QuickGO ontologyBLASTP
4734334744651033hypothetical integral membrane proteinQuickGO ontology
474478475356879Putative 2-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
475412475695284hypothetical protein
4758624779732112Putative phosphoglycerol transferaseQuickGO ontologyBLASTP
478071478523453Putative transcriptional regulator Fur familyQuickGO ontologyBLASTP
478891480461157116S ribosomal RNAQuickGO ontologyBLASTP
480685483603291923S ribosomal RNAQuickGO ontologyBLASTP
483696483774795S ribosomal RNAQuickGO ontology
48381648388873tRNA-AsnQuickGO ontology
48390048398990tRNA-SerQuickGO ontologyBLASTP
48400748407872tRNA-GluQuickGO ontologyBLASTP
48408448415673tRNA-ValQuickGO ontologyBLASTP
48416948424274tRNA-AspQuickGO ontologyBLASTP
484330484996667Hypothetical integral membrane proteinQuickGO ontology
4852284864461219Methionine adenosyltransferase S-adenosylmethionine synthetaseQuickGO ontology
4865244880261503Putative drugH antiporterQuickGO ontologyBLASTP
488007489060hypothetical protein
489190489598409Putative glucitolsorbitol phosphotransferase system enzyme IIAQuickGO ontology
4896144908471234Putative transport proteinQuickGO ontologyBLASTP
491038491374337Transposase orfA of ISLsa2 IS150 familyQuickGO ontology
491400492228829Transposase orfB of ISLsa2 IS150 familyQuickGO ontology
492172492797626Putative N-acetyltransferase GNAT familyQuickGO ontology
4929044939371034Guanosine 5-monophosphate reductase GMP reductaseQuickGO ontology
4940224950371016Putative ion Mg2Co2 transport proteinQuickGO ontology
4950944961111018Putative rRNA large subunit methyltransferase AQuickGO ontology