Pre_GI Gene

Some Help

Host: NC_004567 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004567:343500 Lactobacillus plantarum WCFS1, complete genome

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3435703472653696cell surface protein precursor putativeQuickGO ontologyBLASTP
3472673490541788extracellular proteinQuickGO ontologyBLASTP
349069349488420hypothetical protein
349537349800264integral membrane proteinQuickGO ontologyBLASTP
349902350180279integral membrane proteinQuickGO ontologyBLASTP
350484351401918hypothetical proteinBLASTP
352126352668543hypothetical proteinBLASTP
352683352946264integral membrane proteinQuickGO ontologyBLASTP
353063353266204hypothetical proteinBLASTP
353355353630276hypothetical proteinBLASTP
353648354034387hypothetical proteinBLASTP
354484354675192hypothetical proteinBLASTP
355101355508408hypothetical proteinBLASTP
356779357057279integral membrane proteinQuickGO ontologyBLASTP
357384358001618galactoside O-acetyltransferaseQuickGO ontologyBLASTP
3580053591591155transport proteinQuickGO ontologyBLASTP
359163359954792hydrolase HAD superfamily Cof familyQuickGO ontologyBLASTP
360025360897873transcription regulatorQuickGO ontologyBLASTP
361057361872816hydrolase HAD superfamily Cof familyQuickGO ontologyBLASTP
3623983637741377branched-chain amino acid transport proteinQuickGO ontologyBLASTP
3638193650031185NaH antiporterQuickGO ontologyBLASTP
365388365591204hypothetical proteinBLASTP
365826365978153plantaricin biosynthesis protein PlnRQuickGO ontologyBLASTP
366003366671669immunity protein PlnLQuickGO ontologyBLASTP
366668366841174bacteriocin precursor peptide PlnK putativeQuickGO ontologyBLASTP
366872367039168bacteriocin precursor peptide PlnJ putativeQuickGO ontologyBLASTP
367901368101201immunity protein PlnMQuickGO ontologyBLASTP
368229368396168bacteriocin precursor peptide PlnN putativeQuickGO ontologyBLASTP
3685143697131200plantaricin biosynthesis protein PlnOQuickGO ontologyBLASTP
369744370490747immunity protein PlnP membrane-bound protease CAAX familyQuickGO ontologyBLASTP
370844371032189plantaricin biosynthesis protein PlnQQuickGO ontologyBLASTP
371368371514147plantaricin A precursor peptide induction factorQuickGO ontologyBLASTP
3717053730331329histidine protein kinase PlnB sensor proteinQuickGO ontologyBLASTP
373034373777744response regulator PlnC activatorQuickGO ontologyBLASTP
373896374639744response regulator PlnD repressorQuickGO ontologyBLASTP
374944375717774immunity protein PlnI membrane-bound protease CAAX familyQuickGO ontologyBLASTP
375816375974159bacteriocin precursor peptide PlnF putativeQuickGO ontologyBLASTP
375999376169171bacteriocin precursor peptide PlnE putativeQuickGO ontologyBLASTP
3764363785862151bacteriocin ABC-transporter ATP-binding and permease protein PlnGQuickGO ontologyBLASTP
3786023799781377bacteriocin ABC transporter accessory factor PlnHQuickGO ontologyBLASTP
380068380367300plantaricin biosynthesis protein PlnSQuickGO ontologyBLASTP
380213380758546integral membrane protein PlnT membrane-bound protease CAAX familyQuickGO ontologyBLASTP
380825381493669integral membrane protein PlnU membrane-bound protease CAAX familyQuickGO ontologyBLASTP
381580382260681integral membrane protein plnV membrane-bound protease CAAX familyQuickGO ontologyBLASTP
382354383040687integral membrane protein PlnW membrane-bound protease CAAX familyQuickGO ontologyBLASTP
383216383443228plantaricin biosynthesis protein PlnX putativeQuickGO ontologyBLASTP
383455383748294plantaricin biosynthesis protein PlnY putativeQuickGO ontologyBLASTP
3840383863472310DNA helicase putativeQuickGO ontologyBLASTP