Pre_GI Gene

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Host: NC_006155 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006155:2461262 Yersinia pseudotuberculosis IP 32953, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
246126224623081047selenophosphate synthetaseQuickGO ontologyBLASTP
246236724642951929DNA topoisomerase IIIQuickGO ontologyBLASTP
24642922464582291hypothetical proteinBLASTP
24645952464981387putative pyrophosphohydrolaseQuickGO ontologyBLASTP
24650792465885807exodeoxyribonuclease IIIQuickGO ontologyBLASTP
24666952467555861putative LysR-family transcriptional regulatory proteinQuickGO ontologyBLASTP
246779724690051209putative transposaseQuickGO ontologyBLASTP
2469384246946885tRNA-TyrQuickGO ontologyBLASTP
2469534246961885tRNA-TyrQuickGO ontologyBLASTP
24697672470615849formyltetrahydrofolate deformylaseQuickGO ontologyBLASTP
24706992471163465hypothetical proteinBLASTP
247249724735131017probable response regulatorQuickGO ontologyBLASTP
247382024751661347putative nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
24756012476008408DNA-binding protein HnsQuickGO ontologyBLASTP
24767582477348591thymidine kinaseQuickGO ontologyBLASTP
247809924807742676aldehyde-alcohol dehydrogenaseQuickGO ontologyBLASTP
24816302482274645hypothetical proteinBLASTP
248311224847491638ABC transporter periplasmic oligopeptide-binding protein oppAQuickGO ontologyBLASTP
24848362485756921oligopeptide permease ABC transporter membrane componentQuickGO ontologyBLASTP
24857752486680906ABC oligopeptide transporter permease subunit oppCQuickGO ontologyBLASTP
248669224876931002oligopeptide transporter ATP-binding componentQuickGO ontologyBLASTP
248769024886911002ABC oligopeptide transporter ATP-binding subunit oppFQuickGO ontologyBLASTP