Pre_GI Gene

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Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:1095591 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10955911096337747hypothetical protein
109642210986802259phosphoglycerol transferase related protein alkaline phosphatase superfamilyQuickGO ontologyBLASTP
10991201099725606glycopeptide antibiotics resistance proteinQuickGO ontologyBLASTP
11000061100863858glucose uptake permease glcUQuickGO ontologyBLASTP
110106011024001341glucose-6-phosphate isomerase GPI phosphohexose isomerase PHI vegetative protein 54 VEG54QuickGO ontologyBLASTP
110252711037111185phage protein site-specific recombinase integrase familyQuickGO ontologyBLASTP
11038821104088207predicted ORFQuickGO ontology
110405611050571002predicted ORFQuickGO ontologyBLASTP
11051681105371204hypothetical proteinBLASTP
11053951105820426pyridoxamine 5-phosphate oxidaseQuickGO ontologyBLASTP
11062031106424222predicted ORFQuickGO ontology
11064251107180756predicted ORFQuickGO ontology
11072871107988702predicted ORFQuickGO ontologyBLASTP
11080481108467420hypothetical proteinBLASTP
11084601108798339prophage protein DNA-binding proteinQuickGO ontologyBLASTP
11089331109175243transcriptional regulator xre familyQuickGO ontologyBLASTP
11094171109644228predicted ORFQuickGO ontology
11097321109890159predicted ORFQuickGO ontology
11099561110504549predicted ORFQuickGO ontologyBLASTP
11104831110713231predicted ORFQuickGO ontology
11107171110845129hypothetical proteinBLASTP
11108571111084228hypothetical proteinBLASTP
11110771111247171predicted ORFQuickGO ontology
11112911112166876RecT proteinQuickGO ontologyBLASTP
11121861112950765prophage proteinQuickGO ontologyBLASTP
11129661113922957dnad domain proteinQuickGO ontologyBLASTP
11139351114420486single strand DNA binding protein SSBQuickGO ontologyBLASTP
11144381114653216conserved hypothetical protein with HTH-domainQuickGO ontologyBLASTP
11146501114841192transcriptional regulator DNA-binding protein phage protein regulatory proteinQuickGO ontologyBLASTP
11152111115660450hypothetical proteinBLASTP
11157071115961255phage proteinQuickGO ontologyBLASTP
11160181116359342phage proteinQuickGO ontologyBLASTP
11163721116836465predicted ORFQuickGO ontologyBLASTP
11168481117033186hypothetical protein
11170301117536507phage proteinQuickGO ontologyBLASTP
11175261117705180predicted ORFQuickGO ontology
11183131118675363phage proteinQuickGO ontologyBLASTP
11186721118911240predicted ORFQuickGO ontologyBLASTP
11189901119220231hypothetical protein
11194351119866432predicted ORFQuickGO ontology
112089411220421149phage proteinQuickGO ontologyBLASTP
11220551122597543prophage protein HNH endodeoxyribonuclease family HNH homing endonuclease I-HmuIQuickGO ontologyBLASTP
11225901122910321ribonucleoside-diphosphate reductase class Ib glutaredoxin subunitQuickGO ontologyBLASTP
11229471123480534phage protein terminase small subunitQuickGO ontologyBLASTP
112345211248131362phage protein terminase large subunit PBSX familyQuickGO ontologyBLASTP
112481811262451428phage protein portal protein SPP1 Gp6-likeQuickGO ontologyBLASTP
11262111127203993phage protein Mu protein FQuickGO ontologyBLASTP
11273281127984657phage proteinQuickGO ontologyBLASTP
112800011290131014phage protein minor capsid proteinQuickGO ontologyBLASTP
11292411129615375prophage proteinQuickGO ontologyBLASTP