Pre_GI Gene

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Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:1030970 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103097010324241455aspartylglutamyl-tRNA AsnGln amidotransferase subunit A AdtQuickGO ontologyBLASTP
103242610338561431aspartylglutamyl-tRNA AsnGln amidotransferase subunit B AdtQuickGO ontologyBLASTP
103406810351021035diacylglycerol kinase catalytic domain proteinQuickGO ontologyBLASTP
103510410364711368tRNA uracil-5--methyltransferase related enzyme TrmA family proteinQuickGO ontologyBLASTP
10371741038151978adenine specific DNA methylase ModQuickGO ontologyBLASTP
10381061038426321transposase tnp4QuickGO ontologyBLASTP
10384231038893471transposase IS4QuickGO ontologyBLASTP
10391441039965822adenine specific DNA methylase ModQuickGO ontologyBLASTP
103997010429452976type III DNA restriction-modification systemQuickGO ontologyBLASTP
10431241043285162predicted ORFQuickGO ontology
104356110449761416transposase IS5QuickGO ontologyBLASTP
104530710465061200permease of the major facilitator superfamilyQuickGO ontologyBLASTP
10465831047398816hydrolase HAD superfamily Cof familyQuickGO ontologyBLASTP
10474741048349876polyphosphate kinase 2 AMP-phosphotransferaseQuickGO ontologyBLASTP
104847210503701899neutral endopeptidase endopeptidase OQuickGO ontologyBLASTP