Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:1150000 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11502641151121858glucose uptake permease glcUQuickGO ontologyBLASTP
115131811526581341glucose-6-phosphate isomerase GPI phosphohexose isomerase PHI vegetative protein 54 VEG54QuickGO ontologyBLASTP
11529961153292297antibiotic biosynthesis monooxygenaseQuickGO ontologyBLASTP
11535871154438852DNA-entry nucleaseQuickGO ontologyBLASTP
11548911155181291predicted ORFQuickGO ontology
115531011564731164glycosyltransferaseQuickGO ontologyBLASTP
11569301157847918oxidoreductase GfoIdhMocA family proteinQuickGO ontologyBLASTP
11579481158415468cytosineadenosinecytidinedeoxycytidylate deaminase family protein guanine deaminaseQuickGO ontologyBLASTP
11593051159514210predicted ORFQuickGO ontology
11603671160561195predicted ORFQuickGO ontologyBLASTP
11612241161379156predicted ORFQuickGO ontologyBLASTP
11615821161812231predicted ORFQuickGO ontology
11621991162384186predicted ORFQuickGO ontology
11626811162818138hypothetical protein
116289911640921194permease of the major facilitator superfamilyQuickGO ontologyBLASTP
116452511659551431dipeptidase A Cysteine peptidase MEROPS family C69QuickGO ontologyBLASTP
11669181167094177predicted ORFQuickGO ontology
11675741167759186hypothetical protein
11677521168087336hypothetical protein
11685041168878375phosphoglycerate mutaseQuickGO ontologyBLASTP
11688391169261423predicted ORFQuickGO ontology
11696671170323657transcriptional regulator TetR familyQuickGO ontologyBLASTP
117037911721091731multidrug ABC transporter transmembrane regionQuickGO ontologyBLASTP
117210911739921884multidrug ABC transporter transmembrane regionQuickGO ontologyBLASTP