Pre_GI Gene

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Host: NC_007576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007576:1564739 Lactobacillus sakei subsp. sakei 23K, complete genome

Host Lineage: Lactobacillus sakei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (23K) was originally isolated from a French sausage. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus sakei is the predominant lactic acid bacteria found on fresh meat. This organism is used as a starter in the production of fermented meat products, and plays a major role in preserving meat products by inhibiting the growth of other bacteria.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
156473915658941156N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontology
15660041566977974Putative oxidoreductaseQuickGO ontology
15669571567850Pyrroline-5-carboxylate reductaseQuickGO ontology
15679361568571636Putative surface protein transpeptidase 2 Sortase 2QuickGO ontologyBLASTP
1569085156915672tRNA-GlnQuickGO ontology
1569163156924381tRNA-TyrQuickGO ontologyBLASTP
156932715708461520Di-tripeptideH symporterQuickGO ontology
15712251571861637Putative nucleotide diphosphate hydrolase NUDIX familyQuickGO ontologyBLASTP
1571949157202476tRNA-ThrQuickGO ontologyBLASTP
1572032157210372tRNA-GluQuickGO ontologyBLASTP
1572148157222073tRNA-AsnQuickGO ontology
157222615723421175S ribosomal RNAQuickGO ontologyBLASTP
15724331575351291923S ribosomal RNAQuickGO ontologyBLASTP
15755751577145157116S ribosomal RNAQuickGO ontologyBLASTP
157759115791501560Lysyl-tRNA synthetaseQuickGO ontologyBLASTP
157920815802101003Putative dihydrouridine synthetaseQuickGO ontology
15802781581172895Molecular chaperone Hsp33 familyQuickGO ontology
158118915833562168ATP-dependent zinc metalloendopeptidase FtsH cell division protein FtsHQuickGO ontologyBLASTP
15834301583992563Hypoxanthine phosphoribosyltranferaseQuickGO ontology
158401515854091395Putative ATPase of the PP-loop superfamily cell cycle proteinQuickGO ontologyBLASTP
15854781585939462Putative RNA-binding proteinQuickGO ontologyBLASTP
15860421586456415hypothetical protein
15865861586852267Hypothetical protein with RNA-binding domain S4QuickGO ontologyBLASTP
158686215884601599Putative drugNa antiporter drug efflux pumpQuickGO ontologyBLASTP