Pre_GI Gene

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Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:1538792 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
153879215429584167phage protein minor tail phage proteinQuickGO ontologyBLASTP
15429641543101138predicted ORFQuickGO ontology
15431721543522351phage protein tail componentQuickGO ontologyBLASTP
15436771544312636prophage protein major tail proteinQuickGO ontologyBLASTP
15443131544693381tail componentQuickGO ontologyBLASTP
15446901545109420head-tail joining proteinQuickGO ontologyBLASTP
15451121545294183hypothetical protein
15454461545736291predicted ORFQuickGO ontologyBLASTP
154580815477361929phage protein prohead proteaseQuickGO ontologyBLASTP
154773615488361101portal proteinQuickGO ontologyBLASTP
154913915510101872prophage protein terminase large subunitQuickGO ontologyBLASTP
15510251551489465phage protein terminase small subunitQuickGO ontologyBLASTP
15519711552531561DNA invertase plasmidic resolvaseQuickGO ontologyBLASTP
15529371553686750predicted ORFQuickGO ontologyBLASTP
155383315552481416transposase IS5QuickGO ontologyBLASTP
15561761556616441HNH nucleaseQuickGO ontologyBLASTP
15567151557119405single-strand binding protein familyQuickGO ontologyBLASTP
15571061557873768predicted ORFQuickGO ontologyBLASTP
15578741558080207predicted ORFQuickGO ontology
155912915603671239predicted ORFQuickGO ontology
15632121563739528GCN5-related acetyltransferase including N-acetylase of ribosomal proteins GNAT familyQuickGO ontologyBLASTP
15638361564465630predicted ORFQuickGO ontologyBLASTP
15644621565175714ABC transporterQuickGO ontologyBLASTP
15658301566141312hypothetical protein
15662921567071780Recombinational DNA repair protein recO Recombination protein O RecF pathwayQuickGO ontologyBLASTP
15671071568009903Small GTP-binding protein domainGTP-bindingGTP-binding protein EraQuickGO ontologyBLASTP
15680061568395390Cytidine deaminase homotetramericQuickGO ontologyBLASTP
15683991568797399diacylglycerol kinaseQuickGO ontologyBLASTP
15687811569239459metal-dependent hydrolaseQuickGO ontologyBLASTP
15692431570229987phosphate starvation induced PhoH family protein ATPaseQuickGO ontologyBLASTP
15707961571239444GatBYqeY domain proteinQuickGO ontologyBLASTP
15712581571434177ribosomal protein S21 30S ribosomal protein S21QuickGO ontologyBLASTP
15717071572537831phosphotransferaseQuickGO ontologyBLASTP
15725341573421888endonuclease IV Endodeoxyribonuclease IVQuickGO ontologyBLASTP
15735691574489921integral membrane proteinQuickGO ontologyBLASTP