Pre_GI Gene

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Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:1973500 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197363419749291296GTPaseQuickGO ontologyBLASTP
19750671976065999Predicted xylanasechitin deacetylaseQuickGO ontologyBLASTP
197632719776371311hypothetical proteinBLASTP
197904519806221578hypothetical protein
198069919822251527hypothetical proteinBLASTP
198234619839951650TransposaseQuickGO ontologyBLASTP
198494819859641017Transposase IS30 familyQuickGO ontologyBLASTP
19861921987121930Transposase IS30 familyQuickGO ontologyBLASTP
198849119895491059hypothetical proteinBLASTP
19899501990609660Transposase IS30 familyQuickGO ontologyBLASTP
19909291991771843dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
199184619928711026dTDP-D-glucose 46-dehydrataseQuickGO ontologyBLASTP
19928741993446573dTDP-4-dehydrorhamnose 35-epimerase related enzymeQuickGO ontologyBLASTP