Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:2058857 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
205885720610072151ATP-dependent Clp protease ATP-binding subunit ClpLQuickGO ontologyBLASTP
20614882062165678capsular polysaccharide biosynthesis protein Cap1C WzbQuickGO ontologyBLASTP
20623222063215894cell envelope-related transcriptional attenuatorQuickGO ontologyBLASTP
20640342064702669capsularpolysaccharide synthesis undecaprenyl-phosphate glycosyl-1-phosphategalactose phosphotransferase priming glycosyltransferase WelEQuickGO ontologyBLASTP
20655292066371843dTDP-4-keto-L-rhamnose reductase RmlD Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
206643220674571026dTDP-glucose-46-dehydratase Cps19aN RmlB Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20674602068032573dTDP-4-dehydrorhamnose 35-epimerase related enzyme RmlC Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20680462068918873glucose-1-phosphate thymidylyltransferase RmlA Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20691072070096990capsular exopolysaccharide biosynthesis protein WzmQuickGO ontologyBLASTP
207009820711741077glycosyltransferase WelJQuickGO ontologyBLASTP
207119020722811092capsular exopolysaccharide biosynthesis protein WzyQuickGO ontologyBLASTP
207228120733001020glycosyltransferase WelIQuickGO ontologyBLASTP
20732812074099819glycosyltransferase WelHQuickGO ontologyBLASTP
207408920751681080glycosyltransferase WelGQuickGO ontologyBLASTP
20751842075966783glycosyltransferase WelFQuickGO ontologyBLASTP
207596320773541392capsular exopolysaccharide biosynthesis protein WzxQuickGO ontologyBLASTP
20777322078484753capsular exopolysaccharide biosynthesis protein Wze Tyrosine-protein kinaseQuickGO ontologyBLASTP
20785032079417915capsular exopolysaccharide biosynthesis protein Wzd Chain length regulatorQuickGO ontologyBLASTP
20802152080940726acyltransferase family proteinQuickGO ontologyBLASTP
20812892081789501conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
208190620826197143-ketoacyl-acyl-carrier-protein reductase dehydrogenaseQuickGO ontologyBLASTP
20826162082840225methionyl-tRNA synthetaseQuickGO ontologyBLASTP
20831212083432312transcriptional regulator xre familyQuickGO ontologyBLASTP
20836802084318639phosphoglycerate mutase family proteinQuickGO ontologyBLASTP
20845632085546984oligopeptide ABC transporter ATPase component oppFQuickGO ontologyBLASTP
208554820866001053dipeptideoligopeptidenickel ABC transport system ATPase component oppDQuickGO ontologyBLASTP
20866122087610999dipeptideoligopeptidenickel ABC transport system permease component oppCQuickGO ontologyBLASTP
20876102088533924dipeptideoligopeptidenickel ABC transport system permease components oppB-1QuickGO ontologyBLASTP
208871520903161602oligopeptide ABC transporter oligopeptide-binding protein pxo2-66QuickGO ontologyBLASTP