Pre_GI Gene

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Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:2088780 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20887802089544765capsular polysaccharide biosynthesis protein WzbQuickGO ontologyBLASTP
20897012090594894transcriptional regulator attenuator LytR family WzrQuickGO ontologyBLASTP
209069320917181026dTDP-glucose-46-dehydratase RmIB capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20917212092293573dTDP-4-dehydrorhamnose 35-epimerase related enzyme RmlC capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
20923072092876570glucose-1-phosphate thymidyl transferase RmlAQuickGO ontologyBLASTP
209296820943831416transposase IS5QuickGO ontologyBLASTP
20945302094760231glucose-1-phosphate thymidylyl transferase RmlAQuickGO ontologyBLASTP
20953582096038681undecaprenyl-phosphate glycosyl-1-phosphate galactosephosphotransferase lipopolysaccharide synthesis sugar transferase priming glycosyltransferaseQuickGO ontologyBLASTP
209657520977171143predicted ORFQuickGO ontologyBLASTP
209790020989161017glycosyltransferaseQuickGO ontologyBLASTP
20989772099912936polysaccharide biosynthesis protein rhamnosyl transferase glycosyl transferase family 2QuickGO ontologyBLASTP
209990921010451137glycosyl transferase group 1QuickGO ontologyBLASTP
21010662101863798lipoexopolysaccharide biosynthesis glycosyltransferase EpsFEpsIIDQuickGO ontologyBLASTP
210189421033151422polysaccharide transporter PST family protein flippase wzxQuickGO ontologyBLASTP
210338721045051119UDP-galactopyranose mutase glf UDP-galP mutaseQuickGO ontologyBLASTP
210455421057771224predicted ORFQuickGO ontology
21058272106582756capsular exopolysaccharide family protein WzeQuickGO ontologyBLASTP
21065962107516921capsular polysaccharideexopolysaccaride biosynthesis protein WzdEpsBQuickGO ontologyBLASTP
21078692108594726acyltransferase family proteinQuickGO ontologyBLASTP
21087462109675930phage proteinQuickGO ontologyBLASTP
21096872109992306prophage proteinQuickGO ontology
21103072110807501conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
21109242111637714oxidoreductase short chain dehydrogenase reductase family protein 3-ketoacyl-acyl-carrier-protein reductase SDRQuickGO ontologyBLASTP
21116342111858225methionyl-tRNA synthetaseQuickGO ontologyBLASTP
21121392112450312transcriptional regulator xre familyQuickGO ontologyBLASTP
21126982113336639phosphoglycerate mutase family proteinQuickGO ontologyBLASTP
21135812114564984oligopeptide ABC transporter ATPase component oppFQuickGO ontologyBLASTP
211456621156181053dipeptideoligopeptidenickel ABC transporter ATPase component oppDQuickGO ontologyBLASTP
21156302116628999dipeptideoligopeptidenickel ABC transporter permease component oppCQuickGO ontologyBLASTP
21166282117551924dipeptideoligopeptidenickel ABC transporter permease component oppB-1QuickGO ontologyBLASTP
211773321193521620oligopeptide ABC transporter oligopeptide-binding protein oppAQuickGO ontologyBLASTP