Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:2386924 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
238692423895542631strongly similar to phosphoenolpyruvate synthase pyruvate phosphate dikinaseQuickGO ontologyBLASTP
23898542390411558CBS domain containing proteinQuickGO ontologyBLASTP
2390613239128467223-bisphosphoglycerate-dependent phosphoglycerate mutase 1 Phosphoglyceromutase 1 PGAM1 BPG-dependent PGAM1 dPGM 1QuickGO ontologyBLASTP
239144223925601119conserved hypothetical protein membrane protein by homologyQuickGO ontologyBLASTP
23925792392863285hypothetical proteinBLASTP
239310923942241116L-lactate dehydrogenase FMN-dependent related alpha-hydroxy acid dehydrogenaseQuickGO ontologyBLASTP
23943872394596210CsbD-like superfamily proteinQuickGO ontologyBLASTP
239472423959141191Phosphopentomutase PhosphodeoxyribomutaseQuickGO ontologyBLASTP
239591123971401230transporter of the major facilitator superfamily MFSQuickGO ontologyBLASTP
23971682397920753uridine phosphorylase UrdPase UPaseQuickGO ontologyBLASTP
239790423991211218transporter of the major facilitator superfamily MFSQuickGO ontologyBLASTP
239925024004281179sugar diacid utilization regulatorQuickGO ontologyBLASTP
24006282400885258hypothetical proteinBLASTP
24010752401281207hypothetical proteinBLASTP
24014812401735255hypothetical proteinBLASTP
240230524035371233permease of the major facilitator superfamilyQuickGO ontologyBLASTP
240360624048621257gamma-glutamyl phosphate reductase GPR glutamate-5-semialdehyde dehydrogenase glutamyl-gamma-semialdehyde dehydrogenase GSA dehydrogenaseQuickGO ontologyBLASTP
24049432405779837glutamate 5-kinase ProB-relatedQuickGO ontologyBLASTP
24062282406365138predicted ORFQuickGO ontology
24069832407525543hypothetical proteinBLASTP
240854624097151170predicted ORFQuickGO ontologyBLASTP
24097262410394669ABC transporter ATPase componentQuickGO ontologyBLASTP
24103912411116726predicted ORFQuickGO ontology