Pre_GI: BLASTN Hits

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Query: NC_012967:1403733 Escherichia coli B str. REL606 chromosome, complete genome

Start: 1403733, End: 1425280, Length: 21548

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000913:1404000*1404000142700823009Escherichia coli K12, complete genome014610BLASTN svgBLASTP svg
AC_000091:1407693*1407693143069823006Escherichia coli W3110 DNA, complete genome014610BLASTN svgBLASTP svg
NC_010473:1493983*1493983151640422422Escherichia coli str. K-12 substr. DH10B, complete genome014600BLASTN svgBLASTP svg
CP002516:2580774*2580774260629825525Escherichia coli KO11, complete genome012580BLASTN svgBLASTP svg
CP002185:1493280*1493280151559922320Escherichia coli W, complete genome012580BLASTN svgBLASTP svg
NC_002655:2142587*2142587216371121125Escherichia coli O157:H7 EDL933, complete genome010410BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome04718BLASTN svgBLASTP svg
NC_008563:14755001475500149389218393Escherichia coli APEC O1, complete genome04121BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome02008BLASTN svgBLASTP svg
NC_003198:19082381908238193517826941Salmonella enterica subsp. enterica serovar Typhi str. CT18,01711BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome01554BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome01554BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome01554BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome01221BLASTN svgBLASTP svg
NC_011748:1408280*1408280143235524076Escherichia coli 55989, complete genome01201BLASTN svgBLASTP svg
CU928145:1408280*1408280143235524076Escherichia coli 55989 chromosome, complete genome01201BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome01160BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome01160BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome01160BLASTN svgBLASTP svg
NC_008253:12284851228485125292524441Escherichia coli 536, complete genome01118BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome0952BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome0773BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome0761BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome0757BLASTN svgBLASTP svg
NC_011750:19313841931384195623124848Escherichia coli IAI39 chromosome, complete genome0757BLASTN svgBLASTP svg
NC_009800:16575501657550168574228193Escherichia coli HS, complete genome0733BLASTN svgBLASTP svg
NC_011748:1773642*1773642179521821577Escherichia coli 55989, complete genome0720BLASTN svgBLASTP svg
CU928145:1773642*1773642179521821577Escherichia coli 55989 chromosome, complete genome0720BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome0710BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome0668BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome0662BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome0662BLASTN svgBLASTP svg
NC_007946:1239278*1239278125938320106Escherichia coli UTI89, complete genome0660BLASTN svgBLASTP svg
NC_008563:1175035*1175035119859923565Escherichia coli APEC O1, complete genome0660BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome0658BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome0658BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome0658BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome0658BLASTN svgBLASTP svg
NC_010468:2265423*2265423228519619774Escherichia coli ATCC 8739, complete genome0658BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome0658BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome0658BLASTN svgBLASTP svg
NC_011750:15650001565000158659921600Escherichia coli IAI39 chromosome, complete genome0658BLASTN svgBLASTP svg
NC_011740:45203734520373454479624424Escherichia fergusonii ATCC 35469, complete genome0654BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome0650BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome0650BLASTN svgBLASTP svg
NC_008258:18738051873805189655222748Shigella flexneri 5 str. 8401, complete genome0646BLASTN svgBLASTP svg
NC_020063:2449554*2449554247289823345Enterobacteriaceae bacterium strain FGI 57, complete genome3e-172613BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-167595BLASTN svgBLASTP svg
NC_011740:27699612769961278959919639Escherichia fergusonii ATCC 35469, complete genome3e-160573BLASTN svgBLASTP svg
NC_014121:1848971*1848971187217723207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-150539BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-146527BLASTN svgBLASTP svg
NC_004431:13529061352906137651123606Escherichia coli CFT073, complete genome3e-135490BLASTN svgBLASTP svg
NC_002695:1929215*1929215195011620902Escherichia coli O157:H7 str. Sakai, complete genome2e-127464BLASTN svgBLASTP svg
NC_011750:91995391995393907219120Escherichia coli IAI39 chromosome, complete genome6e-109402BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-108400BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-106392BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome2e-99371BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome8e-96359BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome5e-94353BLASTN svgBLASTP svg
NC_012917:26410002641000266615925160Pectobacterium carotovorum subsp. carotovorum PC1, complete genome7e-93349BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome6e-69270BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome3e-67264BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-66260BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome5e-66260BLASTN svgBLASTP svg
NC_002695:21583142158314218207123758Escherichia coli O157:H7 str. Sakai, complete genome5e-66260BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome5e-66260BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome5e-66260BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome2e-65258BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome2e-65258BLASTN svgBLASTP svg
NC_002695:17946351794635181624421610Escherichia coli O157:H7 str. Sakai, complete genome2e-65258BLASTN svgBLASTP svg
NC_002655:22647732264773228824723475Escherichia coli O157:H7 EDL933, complete genome2e-65258BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome2e-65258BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome8e-65256BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-61244BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-60240BLASTN svgBLASTP svg
AP010958:14725061472506149531022805Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-59236BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome1e-54222BLASTN svgBLASTP svg
NC_009052:25123732512373255632743955Shewanella baltica OS155, complete genome1e-54222BLASTN svgBLASTP svg
AP010958:13057121305712133215626445Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-54220BLASTN svgBLASTP svg
NC_011740:20721732072173211413741965Escherichia fergusonii ATCC 35469, complete genome3e-52214BLASTN svgBLASTP svg
NC_009801:13926961392696142187429179Escherichia coli E24377A, complete genome4e-51210BLASTN svgBLASTP svg
NC_009801:14193241419324143859919276Escherichia coli E24377A, complete genome4e-51210BLASTN svgBLASTP svg
NC_006511:25015002501500252217820679Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-42182BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome2e-41178BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str6e-38167BLASTN svgBLASTP svg
NC_004631:10913031091303111095919657Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-34155BLASTN svgBLASTP svg
NC_003198:18674561867456189339125936Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-34155BLASTN svgBLASTP svg
NC_011080:1944226*1944226198035236127Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-32147BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome2e-31145BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-31145BLASTN svgBLASTP svg
NC_009800:289000*28900031038921390Escherichia coli HS, complete genome9e-31143BLASTN svgBLASTP svg
NC_009800:2788164*2788164280740719244Escherichia coli HS, complete genome1e-29139BLASTN svgBLASTP svg
NC_006511:10632491063249108659923351Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-29139BLASTN svgBLASTP svg
NC_011083:374000*37400039609922100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-29137BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome5e-29137BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome8e-28133BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome3e-27131BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome3e-27131BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome3e-27131BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome8e-25123BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome8e-25123BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_009792:13455001345500136809322594Citrobacter koseri ATCC BAA-895, complete genome1e-23119BLASTN svgBLASTP svg
NC_009792:17701061770106179490624801Citrobacter koseri ATCC BAA-895, complete genome3e-21111BLASTN svgBLASTP svg
NC_006905:1961774*1961774198409922326Salmonella enterica subsp. enterica serovar Choleraesuis str1e-20109BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str5e-1797.6BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010102:11372471137247116298725741Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-1695.6BLASTN svgBLASTP svg
NC_020181:2097066*2097066212464227577Enterobacter aerogenes EA1509E, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013716:1138441*1138441116841529975Citrobacter rodentium ICC168, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1385.7BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete4e-1177.8BLASTN svgBLASTP svg
NC_013421:15453861545386156866923284Pectobacterium wasabiae WPP163, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010159:1668795*1668795168827719483Yersinia pestis Angola, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010634:20046532004653202887424222Yersinia pseudotuberculosis PB1/+, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012917:31980003198000322168023681Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015731:25493*254935177226280Nitrosomonas sp. Is79A3 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_015172:1120000*1120000114225322254Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_012880:3241886*3241886326491123026Dickeya dadantii Ech703, complete genome1e-0560BLASTN svgBLASTP svg
NC_010468:13432281343228136315119924Escherichia coli ATCC 8739, complete genome1e-0560BLASTN svgBLASTP svg