Pre_GI Gene

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Host: NC_000913 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000913:558920 Escherichia coli K12, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5589205615232604predicted outer membrane export usher proteinQuickGO ontologyBLASTP
561565562542978predicted fimbrial-like adhesin proteinQuickGO ontologyBLASTP
562553563068516predicted fimbrial-like adhesin proteinQuickGO ontologyBLASTP
563071563703633predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
56394656402277tRNA-ArgQuickGO ontologyBLASTP
5640385652011164DLP12 prophage predicted integraseQuickGO ontologyBLASTP
565321565584264DLP12 prophage predicted exonucleaseQuickGO ontologyBLASTP
565674565910237DLP12 prophage predicted replication protein fragment pseudogeneQuickGO ontologyBLASTP
566056566364309DLP12 prophage IS3 element protein InsEQuickGO ontologyBLASTP
566361567227867DLP12 prophage IS3 element protein InsFQuickGO ontologyBLASTP
567285567470186DLP12 prophage predicted proteinQuickGO ontologyBLASTP
567538567870333multidrug efflux proteinQuickGO ontologyBLASTP
5681255696511527DLP12 prophage predicted recombinaseQuickGO ontologyBLASTP
570116570667552DLP12 prophage predicted kinase inhibitorQuickGO ontologyBLASTP
570677571474798DLP12 prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
571689572144456DLP12 prophage predicted proteinQuickGO ontologyBLASTP
572144572314171DLP12 prophage conserved proteinQuickGO ontologyBLASTP
572307572597291DLP12 prophage predicted proteinQuickGO ontologyBLASTP
572594572956363DLP12 prophage endonuclease RUSQuickGO ontologyBLASTP
572953573093141DLP12 prophage predicted proteinQuickGO ontologyBLASTP
573179573562384DLP12 prophage predicted antitermination proteinQuickGO ontologyBLASTP
5739605749761017DLP12 prophage IS5 transposase and trans-activatorQuickGO ontologyBLASTP
5749815761081128DLP12 prophage truncated outer membrane porin pseudogeneQuickGO ontologyBLASTP
576621576836216DLP12 prophage predicted phage lysis proteinQuickGO ontologyBLASTP
576836577333498DLP12 prophage predicted lysozymeQuickGO ontologyBLASTP
577330577791462DLP12 prophage predicted murein endopeptidaseQuickGO ontologyBLASTP
577550577732183DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
577823578116294DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
578407578817411DLP12 prophage predicted proteinQuickGO ontologyBLASTP
579103579309207DLP12 prophage predicted proteinQuickGO ontologyBLASTP
580057580602546DLP12 prophage DNA packaging proteinQuickGO ontologyBLASTP
580757581320564DLP12 prophage predicted tail fiber assembly protein pseudogeneQuickGO ontologyBLASTP
581375581959585DLP12 prophage predicted SAM-dependent methyltransferaseQuickGO ontologyBLASTP
582098582283186DLP12 prophage predicted proteinQuickGO ontologyBLASTP
582904583653750DLP12 prophage DNA-binding transcriptional activatorQuickGO ontologyBLASTP
583903584856954DLP12 prophage outer membrane protease VII outer membrane protein 3bQuickGO ontologyBLASTP