Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:1565000 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15651051565287183hypothetical proteinBLASTP
156546515666881224hypothetical proteinBLASTP
15667501567052303transposase ORF A IS600QuickGO ontologyBLASTP
15670881567906819transposase ORF B IS600QuickGO ontologyBLASTP
15678121568465654hypothetical proteinBLASTP
15685091569291783transposaseIS proteinQuickGO ontologyBLASTP
156928815703101023transposase ORF A IS100QuickGO ontologyBLASTP
15710691571281213cold shock protein Qin prophageQuickGO ontologyBLASTP
15715821571797216cold shock protein Qin prophageQuickGO ontologyBLASTP
15725511572766216putative S lysis protein Qin prophageQuickGO ontologyBLASTP
15727711573082312hypothetical proteinBLASTP
15730791573612534putative membrane-associated lysozyme Qin prophageQuickGO ontologyBLASTP
15736091574106498hypothetical proteinBLASTP
15744691574681213cold shock protein Qin prophageQuickGO ontologyBLASTP
15753551575528174hypothetical proteinBLASTP
15756801576090411hypothetical proteinBLASTP
15767701577315546DNA packaging protein DLP12 prophageQuickGO ontologyBLASTP
157729015792151926terminase large subunit from bacteriophage originQuickGO ontologyBLASTP
15792121579418207head-to-tail joining protein W gpW from bacteriophage originQuickGO ontologyBLASTP
157941515810161602Portal protein B minor capsid protein B from bacteriophage originQuickGO ontologyBLASTP
158086215823281467minor capsid protein C from bacteriophage originQuickGO ontologyBLASTP
15823381582670333head decoration protein major capsid protein D from bacteriophage originQuickGO ontologyBLASTP
158272615837511026major head proteinQuickGO ontologyBLASTP
15837541584116363DNA packaging protein from bacteriophage originQuickGO ontologyBLASTP
15841091584549441transposase ORF B fragment IS3 familyQuickGO ontologyBLASTP
1584588158467487Intron_gpIIQuickGO ontologyBLASTP
158467815862011524Group II intron-encoded reverse transcriptasematuraseQuickGO ontologyBLASTP