Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:623810 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
623810624484675glutamate and aspartate transporter subunit membrane component of ABC superfamilyQuickGO ontologyBLASTP
624484625224741glutamate and aspartate transporter subunit membrane component of ABC superfamilyQuickGO ontologyBLASTP
625394626302909glutamate and aspartate transporter subunit periplasmic-binding component of ABC superfamilyQuickGO ontologyBLASTP
6265526275681017IS5 transposase and trans-activatorQuickGO ontologyBLASTP
629213629428216DLP12 prophage predicted phage lysis proteinQuickGO ontologyBLASTP
629428629925498DLP12 prophage predicted lysozymeQuickGO ontologyBLASTP
629922630383462DLP12 prophage predicted murein endopeptidaseQuickGO ontologyBLASTP
630142630324183DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
630415630708294DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
630999631409411DLP12 prophage predicted proteinQuickGO ontologyBLASTP
631695631901207DLP12 prophage predicted proteinQuickGO ontologyBLASTP
632649633194546DLP12 prophage DNA packaging proteinQuickGO ontologyBLASTP
635496636245750DLP12 prophage DNA-binding transcriptional activatorQuickGO ontologyBLASTP
636495637448954DLP12 prophage outer membrane protease VII outer membrane protein 3bQuickGO ontologyBLASTP
637962638723762DNA-binding transcriptional activator of porin biosynthesisQuickGO ontologyBLASTP
638906639796891hypothetical proteinBLASTP
6397976427692973bacteriophage N4 receptor outer membrane subunitQuickGO ontologyBLASTP
6427566449932238bacteriophage N4 receptor inner membrane subunitQuickGO ontologyBLASTP
6451436465851443sensory histidine kinase in two-component regulatory system with CusR senses copper ionsQuickGO ontologyBLASTP
646575647258684DNA-binding response regulator in two-component regulatory system with CusSQuickGO ontologyBLASTP
6474156487881374coppersilver efflux system outer membrane componentQuickGO ontologyBLASTP
648946649278333periplasmic copper-binding proteinQuickGO ontologyBLASTP
6492946505171224coppersilver efflux system membrane fusion proteinQuickGO ontologyBLASTP