Pre_GI Gene

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Host: NC_000913 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000913:1404000 Escherichia coli K12, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14040031404566564hypothetical proteinBLASTP
140458714058191233predicted diguanylate cyclase GGDEF domain signalling proteinQuickGO ontologyBLASTP
14060741407057984zinc transporterQuickGO ontologyBLASTP
140753514089081374ATP-dependent RNA helicase specific for 23S rRNAQuickGO ontologyBLASTP
14090371409972936predicted C32 tRNA thiolaseQuickGO ontologyBLASTP
141002414112591236Rac prophage integraseQuickGO ontologyBLASTP
14112611411476216Rac prophage conserved proteinQuickGO ontologyBLASTP
14115551411764210Rac prophage predicted proteinQuickGO ontologyBLASTP
14117571411951195Rac prophage restriction alleviation proteinQuickGO ontologyBLASTP
14120081412817810Rac prophage recombination and repair proteinQuickGO ontologyBLASTP
141281014154102601 3' specific dsDNA exonuclease', target='_blank' title='Search database for similar gene annotations'>Rac prophage exonuclease VIII 5 - 3 specific dsDNA exonuclease 3' specific dsDNA exonuclease#1=1', target='_blank' title='Retrieve QuickGO gene ontology'>QuickGO ontologyBLASTP
14155121415787276Rac prophage predicted proteinQuickGO ontologyBLASTP
14158621416032171Rac prophage conserved proteinQuickGO ontologyBLASTP
14160321416253222Rac prophage inhibitor of ftsZ killing proteinQuickGO ontologyBLASTP
14166951417183489Rac prophage phage superinfection exclusion proteinQuickGO ontologyBLASTP
14171801417335156Rac prophage predicted proteinQuickGO ontologyBLASTP
14173461417480135Rac prophage predicted proteinQuickGO ontologyBLASTP
14177891418265477Rac prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
14183891418685297Rac prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
14187081419130423Rac prophage predicted proteinQuickGO ontologyBLASTP
14191431420000858Rac prophage conserved proteinQuickGO ontologyBLASTP
14200071420753747Rac prophage predicted DNA replication proteinQuickGO ontologyBLASTP
14207761421336561Rac prophage predicted DNA-binding proteinQuickGO ontologyBLASTP
14213691421668300Rac prophage predicted defective peptidaseQuickGO ontologyBLASTP
14214241421609186Rac prophage predicted lipoproteinQuickGO ontologyBLASTP
142180614232631458Rac prophage potassium transporter subunitQuickGO ontologyBLASTP
14234011423664264Rac prophage conserved proteinQuickGO ontologyBLASTP
14236451424004360Rac prophage predicted proteinQuickGO ontologyBLASTP
142447814255061029Rac prophage predicted tail proteinQuickGO ontologyBLASTP
14254821425637156Rac prophage predicted protein N-ter fragment pseudogeneQuickGO ontologyBLASTP
14257701426750981Rac prophage IS5 transposase and trans-activatorQuickGO ontologyBLASTP
14268381427008171Rac prophage predicted protein C-ter fragment pseudogeneQuickGO ontologyBLASTP