Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:1305712 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13050711305814744putative tail assembly proteinQuickGO ontologyBLASTP
13057121306392681putative tail assembly proteinQuickGO ontologyBLASTP
130663113101043474putative host specificity proteinQuickGO ontologyBLASTP
13101331310771639putative outer membrane precursor LomQuickGO ontologyBLASTP
131083613121491314putative side tail fiber proteinQuickGO ontologyBLASTP
13121511312420270conserved predicted proteinQuickGO ontologyBLASTP
131263613149842349T3SS secreted effector EspX-homologQuickGO ontologyBLASTP
131565113189773327T3SS secreted effector EspN-homologQuickGO ontologyBLASTP
131935413207151362T3SS secreted effector EspK-homologQuickGO ontologyBLASTP
13210781321941864polyamine transporter subunit PotBQuickGO ontologyBLASTP
132192513230611137polyamine transporter subunit PotAQuickGO ontologyBLASTP
132331113245401230peptidase TQuickGO ontologyBLASTP
132468613258161131putative cytoplasmic proteinQuickGO ontologyBLASTP
132603813272851248integraseQuickGO ontologyBLASTP
13275091327829321putative DNA binding proteinQuickGO ontologyBLASTP
132788713289151029hypothetical proteinBLASTP
13289051329369465hypothetical proteinBLASTP
13293621329595234hypothetical proteinBLASTP
13296011329900300hypothetical proteinBLASTP
132989713312971401DNA primaseQuickGO ontologyBLASTP
13314981331749252hypothetical proteinBLASTP
13317461332156411putative single stranded DNA-binding proteinQuickGO ontologyBLASTP