Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:1505405 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
150540515088033399putative tail component of prophageQuickGO ontologyBLASTP
15088711509470600putative outer membrane protein of prophageQuickGO ontologyBLASTP
150952915119102382putative tail fiber proteinQuickGO ontologyBLASTP
15119101512191282hypothetical proteinBLASTP
15122011512905705hypothetical proteinBLASTP
15129161513206291hypothetical proteinBLASTP
15137191514432714cytolethal distending toxin type IV subunit AQuickGO ontologyBLASTP
15144291515250822cytolethal distending toxin type IV subunit BQuickGO ontologyBLASTP
15152471515819573cytolethal distending toxin type IV subunit CQuickGO ontology
151588915173731485hypothetical proteinBLASTP
15175581518520963outer membrane proteaseQuickGO ontologyBLASTP
15188151519165351hypothetical protein
15193981519706309putative integraseQuickGO ontologyBLASTP
15216731522179507putative filament proteinQuickGO ontologyBLASTP
152224815233811134outer membrane pore protein N non-specificQuickGO ontologyBLASTP
152374715272713525probable pyruvate-flavodoxin oxidoreductaseQuickGO ontologyBLASTP
15273421527782441hypothetical proteinBLASTP
15278081528230423heat shock protein HslJQuickGO ontologyBLASTP
15283411529330990D-lactate dehydrogenaseQuickGO ontologyBLASTP
152953815321772640hypothetical proteinBLASTP
15322921532693402hypothetical proteinBLASTP
153306915400616993EntSYbdA MFS transporterQuickGO ontologyBLASTP