Pre_GI Gene

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Host: NC_010473 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010473:498252 Escherichia coli str. K-12 substr. DH10B, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4982525008552604predicted outer membrane export usher proteinQuickGO ontologyBLASTP
500891501874984predicted fimbrial-like adhesin proteinQuickGO ontologyBLASTP
501885502400516predicted fimbrial-like adhesin proteinQuickGO ontologyBLASTP
502403503035633predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
50327850335477tRNA-ArgQuickGO ontologyBLASTP
5033705045331164DLP12 prophage predicted integraseQuickGO ontologyBLASTP
504653504916264DLP12 prophage predicted exonucleaseQuickGO ontologyBLASTP
505388505696309DLP12 prophage IS3 element protein InsEQuickGO ontologyBLASTP
505693506559867DLP12 prophage IS3 element protein InsFQuickGO ontologyBLASTP
506617506802186DLP12 prophage predicted proteinQuickGO ontologyBLASTP
506870507202333DLP12 prophage multidrug resistance proteinQuickGO ontologyBLASTP
5074575089831527DLP12 prophage predicted recombinaseQuickGO ontologyBLASTP
509448509999552DLP12 prophage predicted kinase inhibitorQuickGO ontologyBLASTP
510009510806798DLP12 prophage predicted DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
511021511476456DLP12 prophage predicted proteinQuickGO ontologyBLASTP
511476511646171DLP12 prophage conserved proteinQuickGO ontologyBLASTP
511639511929291DLP12 prophage predicted proteinQuickGO ontologyBLASTP
511926512288363DLP12 prophage endonuclease RUSQuickGO ontologyBLASTP
512285512425141DLP12 prophage predicted proteinQuickGO ontologyBLASTP
512511512894384DLP12 prophage predicted antitermination proteinQuickGO ontologyBLASTP
5132925143081017DLP12 prophage IS5 transposase and trans-activatorQuickGO ontologyBLASTP
515953516168216DLP12 prophage predicted phage lysis proteinQuickGO ontologyBLASTP
516168516665498DLP12 prophage predicted lysozymeQuickGO ontologyBLASTP
516662517123462DLP12 prophage predicted murein endopeptidaseQuickGO ontologyBLASTP
516882517064183DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
517155517448294DLP12 prophage predicted lipoproteinQuickGO ontologyBLASTP
517739518149411DLP12 prophage predicted proteinQuickGO ontologyBLASTP
518435518641207DLP12 prophage predicted proteinQuickGO ontologyBLASTP
519389519934546DLP12 prophage DNA packaging proteinQuickGO ontologyBLASTP
522236522985750DLP12 prophage DNA-binding transcriptional activatorQuickGO ontologyBLASTP
523235524188954DLP12 prophage outer membrane protease VII outer membrane protein 3bQuickGO ontologyBLASTP