Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:2134556 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21345562135167612component of RuvABC resolvasome regulatory subunit RuvAQuickGO ontologyBLASTP
21360462136567522endonuclease RuvCQuickGO ontologyBLASTP
21366022137342741conserved predicted proteinQuickGO ontologyBLASTP
21373712137823453dATP pyrophosphohydrolaseQuickGO ontologyBLASTP
213794121397131773aspartyl-tRNA synthetaseQuickGO ontologyBLASTP
21400232140589567predicted hydrolaseQuickGO ontologyBLASTP
21409432141191249putative DNA damage-inducible proteinQuickGO ontologyBLASTP
21414372142027591T3SS secreted effector EspM-like proteinQuickGO ontologyBLASTP
21422112142861651T3SS secreted effector NleG-like proteinQuickGO ontologyBLASTP
214294021439981059T3SS secreted effector EspW-like proteinQuickGO ontologyBLASTP
21441262144761636T3SS secreted effector NleG-like proteinQuickGO ontologyBLASTP
21448402145412573T3SS secreted effector NleG-like proteinQuickGO ontologyBLASTP
21455232145792270conserved predicted proteinQuickGO ontologyBLASTP
214579421471071314putative side tail fiber proteinQuickGO ontologyBLASTP
21471722147771600putative outer membrane precursor LomQuickGO ontologyBLASTP
214783821513173480putative host specificity proteinQuickGO ontologyBLASTP
21513782152049672putative tail assembly proteinQuickGO ontologyBLASTP
21519472152690744putative tail assembly proteinQuickGO ontologyBLASTP