Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:5011997 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50114495012000552hypothetical proteinBLASTP
501199750131481152putative antirepressorQuickGO ontologyBLASTP
50133665014184819putative replication proteinQuickGO ontologyBLASTP
50141875014675489hypothetical proteinBLASTP
50146425015001360hypothetical proteinBLASTP
50149985015387390bacteriophage V crossover junction endodeoxyribonucleaseQuickGO ontologyBLASTP
50154075015895489hypothetical proteinBLASTP
50162075017202996hypothetical proteinBLASTP
50171745017968795lambdoid prophage Qin antitermination protein Q-like proteinQuickGO ontologyBLASTP
50200855020636552hypothetical proteinBLASTP
50209585021491534Qin prophage predicted lysozymeQuickGO ontologyBLASTP
50214885021985498hypothetical proteinBLASTP
50227945023063270hypothetical proteinBLASTP
50241965024474279hypothetical protein
50244645024955492hypothetical proteinBLASTP
502495550270572103putative DNA packaging protein of prophage CP-933KQuickGO ontologyBLASTP
502719450287741581putative capsid proteinQuickGO ontologyBLASTP
502856950307462178putative proteasescaffold proteinQuickGO ontologyBLASTP
50308335031156324hypothetical proteinBLASTP
50311495031424276hypothetical proteinBLASTP
50314365032014579putative tail component of prophage CP-933KQuickGO ontologyBLASTP
50323485033166819putative tail component of prophage CP-933KQuickGO ontologyBLASTP
50332155033613399putative tail component of prophage CP-933KQuickGO ontologyBLASTP
50336225033951330putative minor tail proteinQuickGO ontologyBLASTP
503391450369883075putative tail component of prophage CP-933KQuickGO ontologyBLASTP
50369885037317330putative minor tail proteinQuickGO ontologyBLASTP
50373275038025699putative minor tail proteinQuickGO ontologyBLASTP
50380305038773744putative tail fiber component K of prophageQuickGO ontologyBLASTP
50386715039318648putative tail component of prophage CP-933KQuickGO ontologyBLASTP