Pre_GI Gene

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Host: NC_011751 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011751:1859606 Escherichia coli UMN026 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
185960618617262121putative ATP-dependent Clp protease proteolytic subunit Endopeptidase ClpQuickGO ontologyBLASTP
186157818631581581putative portal proteinQuickGO ontologyBLASTP
18630861863304219hypothetical proteinBLASTP
186329518653972103putative DNA packaging proteinQuickGO ontologyBLASTP
18653971865891495hypothetical proteinBLASTP
18664541866660207hypothetical proteinBLASTP
18669461867371426hypothetical proteinBLASTP
18675231867696174hypothetical proteinBLASTP
18678681868140273hypothetical proteinBLASTP
18683701868582213cold shock protein Qin prophageQuickGO ontologyBLASTP
18689461869443498hypothetical proteinBLASTP
18694401869973534putative membrane-associated lysozyme Qin prophageQuickGO ontologyBLASTP
18699701870257288hypothetical proteinBLASTP
18702861870501216putative S lysis protein Qin prophageQuickGO ontologyBLASTP
18712551871470216cold shock protein Qin prophageQuickGO ontologyBLASTP
18717711871983213cold shock protein Qin prophageQuickGO ontologyBLASTP
18724051873157753putative antitermination protein Q Qin prophageQuickGO ontologyBLASTP
187317118742201050hypothetical proteinBLASTP
18745671874818252hypothetical proteinBLASTP
18754061875609204hypothetical proteinBLASTP
187586518776521788hypothetical proteinBLASTP
18778711878272402hypothetical proteinBLASTP
187831318793321020hypothetical proteinBLASTP
18792591879780522hypothetical proteinBLASTP
18797641880018255DNA-binding transcriptional regulator DicCQuickGO ontologyBLASTP
18800181880476459transcriptional repressor DicAQuickGO ontologyBLASTP
18805131880824312hypothetical proteinBLASTP
18807841881401618hypothetical proteinBLASTP
1881661188171252DicFQuickGO ontology
18817831882076294putative regulator of cell division encoded by prophageQuickGO ontologyBLASTP
18820731882264192hypothetical proteinBLASTP
188235818848292472putative exonuclease from phage originQuickGO ontologyBLASTP