Pre_GI Gene

Some Help

Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:1352906 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
135132413529161593Putative capsid protein of prophageQuickGO ontologyBLASTP
135290613544111506Putative capsid assembly protein of prophageQuickGO ontologyBLASTP
13544271354798372hypothetical protein
13544481354795348Putative capsid protein of prophageQuickGO ontologyBLASTP
135485313558811029Putative capsid protein of prophageQuickGO ontologyBLASTP
13558851356316432hypothetical proteinBLASTP
13563091356662354Putative head-tail joining protein of prophageQuickGO ontologyBLASTP
13566781357211534Putative tail component of prophageQuickGO ontologyBLASTP
13572081357603396Putative tail component of prophageQuickGO ontologyBLASTP
13576111358357747Putative tail fiber component V of prophageQuickGO ontologyBLASTP
13583541359004651hypothetical protein
13583761358807432Putative tail component of prophageQuickGO ontologyBLASTP
13588341359247414Putative tail component of prophageQuickGO ontologyBLASTP
135922813617892562Putative tail component of prophageQuickGO ontologyBLASTP
13617861362115330Putative tail fiber component M of prophageQuickGO ontologyBLASTP
13621151362813699Putative tail component of prophageQuickGO ontologyBLASTP
13621661362969804hypothetical proteinBLASTP
13628641363562699Putative tail fiber component K of prophageQuickGO ontologyBLASTP
13635261364140615Putative tail assembly protein of cryptic prophageQuickGO ontologyBLASTP
136448413681763693Putative tail component of prophageQuickGO ontologyBLASTP
13682441368843600Putative Lom-like outer membrane protein of prophageQuickGO ontologyBLASTP
136899513710582064hypothetical proteinBLASTP
13693391369503165hypothetical protein
13710551371333279hypothetical proteinBLASTP
13713431371636294hypothetical proteinBLASTP
13714231371797375hypothetical proteinBLASTP
13717471371872126hypothetical protein
13718291372494666Hypothetical protein ybcY precursorQuickGO ontologyBLASTP
13725541372820267Hypothetical protein ylcEQuickGO ontologyBLASTP
13730521373915864spermidineputrescine ABC transporter membrane componentQuickGO ontologyBLASTP
137389913750351137putrescinespermidine ABC transporter ATPaseQuickGO ontologyBLASTP
13750141375265252hypothetical proteinBLASTP
137524013765111272peptidase TQuickGO ontologyBLASTP