Pre_GI: BLASTN Hits

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Query: NC_009495:2685646 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 2685646, End: 2708278, Length: 22633

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014328:1307490*1307490133121623727Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-159569BLASTN svgBLASTP svg
NC_008593:1461771*1461771148498223212Clostridium novyi NT, complete genome1e-103385BLASTN svgBLASTP svg
NC_021182:2422226*2422226244735325128Clostridium pasteurianum BC1, complete genome3e-92347BLASTN svgBLASTP svg
NC_003366:2057656*2057656208209924444Clostridium perfringens str. 13, complete genome4e-70274BLASTN svgBLASTP svg
NC_010520:11460001146000116884922850Clostridium botulinum A3 str. Loch Maree, complete genome2e-68268BLASTN svgBLASTP svg
NC_003030:1811820*1811820183505323234Clostridium acetobutylicum ATCC 824, complete genome6e-66260BLASTN svgBLASTP svg
NC_012563:2761570*2761570280230240733Clostridium botulinum A2 str. Kyoto, complete genome1e-60242BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome5e-60240BLASTN svgBLASTP svg
NC_012563:29791472979147300249023344Clostridium botulinum A2 str. Kyoto, complete genome1e-57232BLASTN svgBLASTP svg
NC_008262:1950205*1950205196967819474Clostridium perfringens SM101, complete genome3e-55224BLASTN svgBLASTP svg
NC_010520:14279811427981145070222722Clostridium botulinum A3 str. Loch Maree, complete genome3e-55224BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome5e-54220BLASTN svgBLASTP svg
NC_010520:21715842171584219449022907Clostridium botulinum A3 str. Loch Maree, complete genome5e-51210BLASTN svgBLASTP svg
NC_015687:1811573*1811573183463823066Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-44188BLASTN svgBLASTP svg
NC_010520:2635750*2635750265654120792Clostridium botulinum A3 str. Loch Maree, complete genome4e-42180BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome4e-39170BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome6e-38167BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome6e-38167BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome2e-35159BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome2e-34155BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome4e-33151BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome9e-31143BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome4e-30141BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome1e-26129BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome5e-26127BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome5e-26127BLASTN svgBLASTP svg
NC_014328:23269302326930235084023911Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-25125BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome8e-25123BLASTN svgBLASTP svg
NC_010516:34660003466000348809922100Clostridium botulinum B1 str. Okra, complete genome2e-22115BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome2e-19105BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome8e-19103BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_016012:805680*80568082784122162Candidatus Arthromitus sp. SFB-rat-Yit, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014328:85290*8529014387558586Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:48824944882494490859926106Clostridium pasteurianum BC1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010516:583870*58387060159917730Clostridium botulinum B1 str. Okra, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011830:3786173*3786173381115924987Desulfitobacterium hafniense DCB-2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014657:1193985*1193985121535121367Caldicellulosiruptor owensensis OL chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011653:1616423*1616423164434727925Thermosipho africanus TCF52B, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013192:61893661893664793428999Leptotrichia buccalis DSM 1135, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014150:1304573*1304573132443919867Brachyspira murdochii DSM 12563 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014328:25889942588994260699318000Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014328:34829803482980351005727078Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018515:989616*989616101215322538Desulfosporosinus meridiei DSM 13257 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020291:2701149*2701149272507823930Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021182:96683996683998495918121Clostridium pasteurianum BC1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003454:1346500*1346500136586219363Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete3e-0971.9BLASTN svgBLASTP svg
NC_010520:496500*49650051930622807Clostridium botulinum A3 str. Loch Maree, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021182:4829000*4829000485931530316Clostridium pasteurianum BC1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012563:122000*12200014417822179Clostridium botulinum A2 str. Kyoto, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:1346261*1346261136580919549Clostridium pasteurianum BC1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005295:64727564727567182424550Ehrlichia ruminantium str. Welgevonden, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006832:62705762705765166924613Ehrlichia ruminantium str. Welgevonden, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006831:62290662290664732924424Ehrlichia ruminantium str. Gardel, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020291:5641444*5641444566381622373Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013517:2633574*2633574265613222559Sebaldella termitidis ATCC 33386, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014166:401815*40181542611724303Arcobacter nitrofigilis DSM 7299 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013517:2909798*2909798293751827721Sebaldella termitidis ATCC 33386, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:2567911*2567911258780819898Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:23051102305110232828423175Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg