Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:4602683 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
460268346037561074putative nucleic-acid-binding protein contains the HHH domainQuickGO ontologyBLASTP
460377546051271353DNA repair protein RadAQuickGO ontologyBLASTP
460539746078352439ATPase with chaperone activity ATP-binding subunitQuickGO ontologyBLASTP
460784946088711023arginine kinaseQuickGO ontologyBLASTP
46088734609397525hypothetical proteinBLASTP
46094714609929459transcriptional repressor of class III stress genesQuickGO ontologyBLASTP
46102834610549267hypothetical proteinBLASTP
4610727461080175tRNA-AsnQuickGO ontology
461081146109271175S ribosomal RNAQuickGO ontologyBLASTP
4616390461646576tRNA-AlaQuickGO ontologyBLASTP
461695946183381380UDP-N-acetylmuramoylalanine--D-glutamate ligaseQuickGO ontologyBLASTP
46185834618864282hypothetical protein
461932746207181392glycyl-tRNA synthetase dimeric typeQuickGO ontologyBLASTP
4621299462137375tRNA-AsnQuickGO ontology
462176646233041539lysyl-tRNA synthetase class IIQuickGO ontologyBLASTP
46233194623801483transcription elongation factor GreAQuickGO ontologyBLASTP
46241004625071972putative TIM-barrel protein nifR3 familyQuickGO ontologyBLASTP
46250524625858807pantothenate kinase type IIIQuickGO ontologyBLASTP
462603146277011671formyltetrahydrofolate synthetaseQuickGO ontologyBLASTP