Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:4829000 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
483006048312771218putative transcriptional regulatorQuickGO ontologyBLASTP
483141748326731257Major Facilitator Superfamily transporterQuickGO ontologyBLASTP
483293348372764344DNA polymerase III alpha chainQuickGO ontologyBLASTP
483780148395821782Retron-type reverse transcriptaseQuickGO ontologyBLASTP
484013248412561125transposase family proteinQuickGO ontologyBLASTP
484178548432361452transposaseQuickGO ontologyBLASTP
484333848445821245Retron-type reverse transcriptaseQuickGO ontologyBLASTP
48455024845894393hypothetical protein
484664848480811434YVTN family beta-propeller repeat proteinQuickGO ontologyBLASTP
48484324848725294transposaseQuickGO ontologyBLASTP
48487734849600828transposaseQuickGO ontologyBLASTP
4849815485091210983-carboxymuconate cyclaseQuickGO ontologyBLASTP
48518484852327480rRNA large subunit m3Psi methyltransferase RlmHQuickGO ontologyBLASTP
48523464853227882putative low-complexity proteinQuickGO ontologyBLASTP
485348148546531173aspartatetyrosinearomatic aminotransferaseQuickGO ontologyBLASTP
48548334855333501preprotein translocase subunit SecA ATPase RNA helicaseQuickGO ontologyBLASTP
48553494855507159hypothetical protein
48554884856057570sporulationspore germination proteinQuickGO ontologyBLASTP
48561674856952786metal-dependent hydrolase beta-lactamase superfamily IQuickGO ontologyBLASTP
485698648582451260UDP-N-acetylglucosamine 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
48587674859315549hypothetical proteinBLASTP