Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:2422226 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
242222624246552430glycogenstarchalpha-glucan phosphorylaseQuickGO ontologyBLASTP
24250072425210204cold shock proteinQuickGO ontologyBLASTP
24256612426251591hypothetical proteinBLASTP
242648524277861302AAA ATPaseQuickGO ontologyBLASTP
242778924301432355DNA helicase Rad3QuickGO ontologyBLASTP
243057824350984521glutamate synthase family proteinQuickGO ontologyBLASTP
243511224365481437NADHNADPH-dependent glutamate synthase small subunitQuickGO ontologyBLASTP
24367622437202441rrf2 family protein putative transcriptional regulatorQuickGO ontologyBLASTP
243719524383881194cysteine desulfurase NifSQuickGO ontologyBLASTP
24383912438822432FeS cluster assembly scaffold protein NifUQuickGO ontologyBLASTP
24390462439552507hypothetical proteinBLASTP
243954224405551014putative permeaseQuickGO ontologyBLASTP
244100424436432640alanine--tRNA ligaseQuickGO ontologyBLASTP
24437192443976258hypothetical proteinBLASTP
24440342444456423RNAse H-fold protein YqgFQuickGO ontologyBLASTP
24446812444947267hypothetical proteinBLASTP
24450082445472465Fe2Zn2 uptake regulation proteinQuickGO ontologyBLASTP
244568624473531668hypothetical proteinBLASTP