Pre_GI Gene

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Host: NC_021182 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_021182:4882494 Clostridium pasteurianum BC1, complete genome

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
488249448846532160topoisomerase IAQuickGO ontologyBLASTP
48852214886183963L-lactate dehydrogenaseQuickGO ontologyBLASTP
48863944887212819acetyl-CoA carboxylase carboxyl transferase alpha subunitQuickGO ontologyBLASTP
48872314888094864acetyl-CoA carboxylase carboxyl transferase beta subunitQuickGO ontologyBLASTP
488821648895591344acetyl-CoA carboxylase biotin carboxylase subunitQuickGO ontologyBLASTP
48897954890220426beta-hydroxyacyl-acyl carrier protein dehydratase FabZQuickGO ontologyBLASTP
48903374890831495acetyl-CoA carboxylase biotin carboxyl carrier proteinQuickGO ontologyBLASTP
489083748920781242beta-ketoacyl-acyl-carrier-protein synthase IIQuickGO ontologyBLASTP
489211448928697563-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
48928814893816936malonyl CoA-acyl carrier protein transacylaseQuickGO ontologyBLASTP
48938474894785939putative enoyl-acyl-carrier-protein reductase IIQuickGO ontologyBLASTP
489492648959129873-oxoacyl-acyl-carrier-protein synthase IIIQuickGO ontologyBLASTP
48959174896384468transcriptional regulatorQuickGO ontologyBLASTP
4896466489754210772-nitropropane dioxygenase-like enzymeQuickGO ontologyBLASTP
489797548993961422membrane-fusion proteinQuickGO ontologyBLASTP
48995584900238681ABC-type antimicrobial peptide transport system ATPase componentQuickGO ontologyBLASTP
490023949014321194ABC-type transport system involved in lipoprotein release permease componentQuickGO ontologyBLASTP
49016834901970288hypothetical protein
49020484902254207hypothetical protein
49028224903703882510-methylenetetrahydrofolate reductaseQuickGO ontologyBLASTP
490384549051011257competencedamage-inducible protein CinA-like proteinQuickGO ontologyBLASTP
49052144906071858metalloendopeptidase-like membrane proteinQuickGO ontologyBLASTP
49064804907460981DnaD-like proteinQuickGO ontologyBLASTP
49074534908436984DNA replication proteinQuickGO ontologyBLASTP