Pre_GI: BLASTN Hits

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Query: NC_011747:86000 Escherichia coli S88 plasmid pECOS88, complete sequence

Start: 86000, End: 108099, Length: 22100

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome04504BLASTN svgBLASTP svg
NC_008253:29650029650032229825799Escherichia coli 536, complete genome04347BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence01342BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence01078BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence0729BLASTN svgBLASTP svg
NC_010102:28817142881714290709925386Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-151543BLASTN svgBLASTP svg
NC_006511:27184012718401273705118651Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-150541BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome4e-150539BLASTN svgBLASTP svg
NC_004631:27553062755306277886423559Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-144519BLASTN svgBLASTP svg
NC_003198:27694492769449279300723559Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-144519BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-140507BLASTN svgBLASTP svg
NC_006905:28576992857699289909341395Salmonella enterica subsp. enterica serovar Choleraesuis str5e-137496BLASTN svgBLASTP svg
NC_010067:17105317105319109420042Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-134488BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome2e-118434BLASTN svgBLASTP svg
NC_011080:28979772897977291952121545Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-91345BLASTN svgBLASTP svg
NC_011149:28298112829811285287123061Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-75289BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome3e-55224BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome1e-54222BLASTN svgBLASTP svg
NC_004431:24449722444972246809923128Escherichia coli CFT073, complete genome1e-54222BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome5e-54220BLASTN svgBLASTP svg
NC_007606:4182188*4182188420162219435Shigella dysenteriae Sd197, complete genome1e-51212BLASTN svgBLASTP svg
NC_003197:45518804551880457449822619Salmonella typhimurium LT2, complete genome4e-48200BLASTN svgBLASTP svg
NC_011083:1323827*1323827134240718581Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-47196BLASTN svgBLASTP svg
NC_014838:58958158958161723827658Pantoea sp. At-9b plasmid pPAT9B01, complete sequence7e-44186BLASTN svgBLASTP svg
NC_004631:1881214*1881214190534324130Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-42182BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-42182BLASTN svgBLASTP svg
NC_003198:1078113*1078113110191423802Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-42182BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-42180BLASTN svgBLASTP svg
NC_004631:1182883*1182883121459931717Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-42180BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-42180BLASTN svgBLASTP svg
NC_010102:23228662322866235445731592Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-42180BLASTN svgBLASTP svg
NC_010102:39554793955479397940323925Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-42180BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-42180BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome3e-40174BLASTN svgBLASTP svg
NC_010159:1668795*1668795168827719483Yersinia pestis Angola, complete genome4e-39170BLASTN svgBLASTP svg
NC_004088:2366000*2366000239081024811Yersinia pestis KIM, complete genome6e-38167BLASTN svgBLASTP svg
NC_010159:74181974181976361621798Yersinia pestis Angola, complete genome6e-38167BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome2e-37165BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome2e-37165BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome2e-37165BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome2e-37165BLASTN svgBLASTP svg
NC_004088:15104671510467153309222626Yersinia pestis KIM, complete genome2e-37165BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome2e-37165BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome2e-37165BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome2e-37165BLASTN svgBLASTP svg
NC_008149:14403711440371146301222642Yersinia pestis Nepal516, complete genome2e-37165BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome2e-37165BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome2e-37165BLASTN svgBLASTP svg
NC_010465:34653513465351350059935249Yersinia pseudotuberculosis YPIII, complete genome2e-37165BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome2e-37165BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome2e-37165BLASTN svgBLASTP svg
NC_010159:25969525969528600726313Yersinia pestis Angola, complete genome2e-37165BLASTN svgBLASTP svg
NC_010159:24409472440947245913218186Yersinia pestis Angola, complete genome2e-37165BLASTN svgBLASTP svg
NC_010159:14179931417993144109923107Yersinia pestis Angola, complete genome2e-37165BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome2e-37165BLASTN svgBLASTP svg
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome2e-37165BLASTN svgBLASTP svg
NC_003143:74116974116977078329615Yersinia pestis CO92, complete genome1e-36163BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome1e-36163BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome1e-36163BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome1e-36163BLASTN svgBLASTP svg
NC_004088:38591733859173388653627364Yersinia pestis KIM, complete genome1e-36163BLASTN svgBLASTP svg
NC_005810:33330003333000336198528986Yersinia pestis biovar Microtus str. 91001, complete genome1e-36163BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome1e-36163BLASTN svgBLASTP svg
NC_008149:65070665070667964628941Yersinia pestis Nepal516, complete genome1e-36163BLASTN svgBLASTP svg
NC_008150:34300003430000345505925060Yersinia pestis Antiqua, complete genome1e-36163BLASTN svgBLASTP svg
NC_010159:10719371071937109241320477Yersinia pestis Angola, complete genome1e-36163BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome1e-36163BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_013421:27205002720500274898028481Pectobacterium wasabiae WPP163, complete genome6e-35157BLASTN svgBLASTP svg
NC_011749:34056*340565613322078Escherichia coli UMN026 plasmid p1ESCUM, complete sequence5e-26127BLASTN svgBLASTP svg
NC_014258:35584535584537624420400Pantoea vagans C9-1 plasmid pPag3, complete sequence1e-20109BLASTN svgBLASTP svg
NC_011080:1944226*1944226198035236127Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-19105BLASTN svgBLASTP svg
NC_009787:17344173444299925656Escherichia coli E24377A plasmid pETEC_35, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_020181:10574761057476107717519700Enterobacter aerogenes EA1509E, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015663:43471874347187437073923553Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012779:30596930596933285826890Edwardsiella ictaluri 93-146, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome2e-0765.9BLASTN svgBLASTP svg