Pre_GI Gene

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Host: NC_011749 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011749:34056 Escherichia coli UMN026 plasmid p1ESCUM, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34056354351380hypothetical proteinBLASTP
3553936069531hypothetical proteinBLASTP
36107380531947hypothetical proteinBLASTP
3834039155816Na-translocating NADH-quinone reductase subunit CQuickGO ontologyBLASTP
3933839844507copper-sensitivity suppressor DQuickGO ontologyBLASTP
3983440061228copper-sensitivity suppressor CQuickGO ontologyBLASTP
4014240294153transposase IS26 fragmentQuickGO ontologyBLASTP
402854035470RNAoutQuickGO ontology
4045540730276IS1 repressor protein InsAQuickGO ontologyBLASTP
4064941152504transposaseQuickGO ontologyBLASTP
41203423301128transposase IS4 family IS10QuickGO ontologyBLASTP
4234042756417transcriptionnal regulator involved in tetracycline resistanceQuickGO ontologyBLASTP
4276943437669transcriptionnal regulator involved in tetracycline resistanceQuickGO ontologyBLASTP
43550448031254tetracycline efflux transporterQuickGO ontologyBLASTP
4483445460627TetR family transcriptional regulatorQuickGO ontologyBLASTP
4543846124687ArsR family regulatory proteinQuickGO ontologyBLASTP
4613246629498regulatory protein in the aminoacid metabolismQuickGO ontologyBLASTP
4677147274504transposaseQuickGO ontologyBLASTP
4719347468276IS1 repressor protein InsAQuickGO ontologyBLASTP
4780248305504transposaseQuickGO ontologyBLASTP
4822448499276IS1 repressor protein InsAQuickGO ontologyBLASTP
4864748751105hypothetical protein
4874849212465Plasmid stable inheritance proteinQuickGO ontologyBLASTP
4908249339258Plasmid stable inheritance repressor proteinQuickGO ontologyBLASTP
4940049621222hypothetical protein
4943250085654hypothetical proteinBLASTP
5102351892870replication proteinQuickGO ontologyBLASTP
519655205490IncQuickGO ontology
5218052440261replication proteinQuickGO ontologyBLASTP
5268053270591hypothetical proteinBLASTP
5330853517210hemolysin expression-modulating protein hmoQuickGO ontologyBLASTP
5356354099537nucleaseQuickGO ontologyBLASTP
5426954481213hypothetical proteinBLASTP
5461055170561conjugal transfer fertility inhibition protein FinOQuickGO ontologyBLASTP
5527356133861alphabeta hydrolaseQuickGO ontologyBLASTP