Pre_GI Gene

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Host: NC_011083 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011083:1323827 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
132382713251971371adenylosuccinate lyaseQuickGO ontologyBLASTP
13252011325842642hypothetical proteinBLASTP
132592913270351107tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseQuickGO ontologyBLASTP
13270891327550462hydrolase NUDIX familyQuickGO ontologyBLASTP
13275621327891330putative secreted proteinQuickGO ontologyBLASTP
13278881328625738ribosomal large subunit pseudouridine synthase EQuickGO ontologyBLASTP
132872513299751251isocitrate dehydrogenase NADP-dependentQuickGO ontologyBLASTP
13301711330629459transposase forQuickGO ontologyBLASTP
133112313322471125putative cytoplasmic proteinQuickGO ontologyBLASTP
13332321334020789EnvFQuickGO ontologyBLASTP
13345101334749240hypothetical proteinBLASTP
13349401335461522EnvEQuickGO ontologyBLASTP
13367861336914129hypothetical proteinBLASTP
13372931337850558virulence membrane protein PagCQuickGO ontologyBLASTP
13388471338972126hypothetical proteinBLASTP
13390871339431345putative periplasmic proteinQuickGO ontologyBLASTP
13398091339934126hypothetical proteinBLASTP
13400661340239174hypothetical proteinBLASTP
13405551341025471heat shock proteinQuickGO ontologyBLASTP
134136413424071044putative cytoplasmic proteinQuickGO ontologyBLASTP