Pre_GI Gene

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Host: NC_009790 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009790:42112 Escherichia coli E24377A plasmid pETEC_74, complete sequence

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: ETEC is the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the pili. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4178942154366IS2 transposase orfAQuickGO ontologyBLASTP
4211243023912IS2 transposase orfBQuickGO ontologyBLASTP
4318943461273IS1 transposase orfAQuickGO ontologyBLASTP
4348843883396IS1 transposase orfBQuickGO ontologyBLASTP
4424044917678IS66 family element orf1QuickGO ontologyBLASTP
4491745264348IS66 family element orf2QuickGO ontologyBLASTP
45284468551572IS66 family element transposaseQuickGO ontologyBLASTP
4753547810276IS1 transposase orfAQuickGO ontologyBLASTP
49306534064101secreted serine peptidase EatAQuickGO ontologyBLASTP
5374954471723HTH-type transcriptional regulator YdeOQuickGO ontologyBLASTP
5470155381681EAL domain proteinQuickGO ontologyBLASTP
5582156462642resolvase domain proteinQuickGO ontologyBLASTP
5679257505714resolvaseQuickGO ontologyBLASTP
5750657811306cytotoxic protein CcdBQuickGO ontologyBLASTP
5781358061249post-segregation antitoxin CcdAQuickGO ontologyBLASTP
5847658733258hypothetical proteinBLASTP
5873359263531hypothetical proteinBLASTP
5952860349822polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
60352614401089glycosyl transferase group 1 family proteinQuickGO ontologyBLASTP
6144562395951hypothetical proteinBLASTP
6234062453114hypothetical protein
6346763685219IS630 transposase truncationQuickGO ontologyBLASTP
6494065209270IS1294 transposase truncationQuickGO ontologyBLASTP
65257667951539IS66 family element transposaseQuickGO ontologyBLASTP
6684567192348IS66 family element orf2QuickGO ontologyBLASTP
6718967578390IS66 family elementQuickGO ontologyBLASTP
6766667791126hypothetical protein
676846778299hypothetical protein
6789868257360type IV conjugative transfer system pilin TraAQuickGO ontologyBLASTP
6825968564306type IV conjugative transfer system protein TraLQuickGO ontologyBLASTP
6858469147564type IV conjugative transfer system protein TraEQuickGO ontologyBLASTP