Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:296500 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2965252975471023transposase for insertion sequence IS100QuickGO ontologyBLASTP
297547298326780putative IS100 transposaseQuickGO ontologyBLASTP
2983773001281752truncated phage T7 exclusion proteinQuickGO ontologyBLASTP
300321300704384putative transposaseQuickGO ontologyBLASTP
301428301625198hypothetical protein
3016493026831035phospho-2-dehydro-3-deoxyheptonate aldolase Trp-sensitiveQuickGO ontologyBLASTP
302813302992180hypothetical protein
303560304414855transposaseQuickGO ontologyBLASTP
304411304710300putative transposaseQuickGO ontologyBLASTP
3048063058611056ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
306132306464333hypothetical protein
306641307327687hypothetical proteinBLASTP
307422307892471hypothetical proteinBLASTP
308401308850450hypothetical proteinBLASTP
309092309661570hypothetical proteinBLASTP
309936310157222fimbrial transcription regulator protein FaeAQuickGO ontologyBLASTP
310576310905330major pilu subunit operon regulatory protein PapBQuickGO ontologyBLASTP
311279311824546S-fimbrial protein subunit precursorQuickGO ontologyBLASTP
311895312434540putative minor F1C fimbrial subunit precursorQuickGO ontologyBLASTP
312475313170696F1C periplasmic chaperoneQuickGO ontologyBLASTP
3132413158712631F1C fimbrial usherQuickGO ontologyBLASTP
315887316411525F1C minor fimbrial subunit F precursorQuickGO ontologyBLASTP
316433316924492F1C minor fimbrial subunit protein G presursorQuickGO ontologyBLASTP
316986317885900F1C putative fimbrial adhesin precursorQuickGO ontologyBLASTP
318189318929741hypothetical proteinBLASTP
319076319627552MarR-family transcriptional regulatory proteinQuickGO ontologyBLASTP
3201213222982178TonB dependent outer membrane siderophore receptorQuickGO ontologyBLASTP