Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:1078113 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10781131078775663hypothetical proteinBLASTP
10789461079362417hypothetical proteinBLASTP
10794071079724318hypothetical proteinBLASTP
107978210809931212hypothetical proteinBLASTP
10812081081755548BLASTP
108178110832711491putative transcriptional regulator pseudogeneQuickGO ontologyBLASTP
10821251082583459transposase for insertion sequence element IS200QuickGO ontologyBLASTP
10833201083601282putative acylphosphataseQuickGO ontologyBLASTP
10835981083927330hypothetical protein in helD-serT intergenic regionQuickGO ontologyBLASTP
10840141084673660hypothetical proteinBLASTP
1085068108515588tRNA-SerQuickGO ontologyBLASTP
10853371085795459transposase for insertion sequence element is200QuickGO ontologyBLASTP
10860031086683681hypothetical proteinBLASTP
10869061087781876hypothetical proteinBLASTP
10883291088670342cell invasion proteinQuickGO ontologyBLASTP
108868710903721686cell invasion proteinQuickGO ontologyBLASTP
10907041090874171hypothetical proteinBLASTP
10908751090985111hypothetical proteinBLASTP
109109410925631470putative secreted peptidaseQuickGO ontologyBLASTP
109273610941001365histidine kinaseQuickGO ontologyBLASTP
10940931094839747response regulatorQuickGO ontologyBLASTP
10949091095319411hypothetical proteinBLASTP
109565210961645134-hydroxyphenylacetate 3-monooxygenase coupling proteinQuickGO ontologyBLASTP
1096182109748913084-hydroxyphenylacetate 3-monooxygenaseQuickGO ontologyBLASTP
10975951098035441homoprotocatechuate degradative operon repressorQuickGO ontologyBLASTP
1098310109959912904-hydroxyphenylacetate degradation bifunctional isomerasedecarboxylase includes 2-hydroxyhepta-24-diene-17-dioate isomeraseQuickGO ontologyBLASTP
109959611010611466BLASTP
1101063110191485234-dihydroxyphenylacetate 23-dioxygenaseQuickGO ontologyBLASTP