Pre_GI: BLASTP Hits

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Query: NC_007799:647514:670231 Ehrlichia chaffeensis str. Arkansas, complete genome

Start: 670231, End: 671124, Length: 894

Host Lineage: Ehrlichia chaffeensis; Ehrlichia; Anaplasmataceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain is the first isolate of Ehrlichia chaffeensis, which was obtained from a patient on an army base in Arkansas, USA in 1990. Causes disease in humans. This organism is an obligate intracellular pathogen that exists within vacuoles in the cytoplasm of monocytes or granulocytes. Transferred during an insect (tick) bite, it can cause disease in humans (human monocytic ehrlichiosis) and can reside in several other animals and is a problem in immunocompromised patients. The bacterium inhibits phagosome-lysozome fusion as well as programmed cell death (apoptosis) of the host cell, similar to what is observed with Anaplasma phagocytophilum.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007354:569321:571776571776572678903Ehrlichia canis str. Jake, complete genomeSigma-70 region 2:Sigma-70 region 44e-153540
NC_006831:664000:666015666015666974960Ehrlichia ruminantium str. Gardel, complete genomeRNA polymerase sigma-32 factor3e-136484
NC_005295:689500:690509690509691399891Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor5e-136483
NC_006832:668913:670354670354671316963Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor8e-136483
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor1e-71270
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-322e-71269
NC_014313:2059933:206294420629442063834891Hyphomicrobium denitrificans ATCC 51888 chromosome, completeRNA polymerase, sigma 32 subunit, RpoH2e-70266
NC_010103:1577750:159903115990311599942912Brucella canis ATCC 23365 chromosome I, complete sequencealternative sigma factor RpoH4e-68258
NC_015857:1609670:163095016309501631861912Brucella pinnipedialis B2/94 chromosome chromosome 1, completeRNA polymerase factor sigma-324e-68258
NC_004310:1578918:160019816001981601109912Brucella suis 1330 chromosome I, complete sequenceRNA polymerase sigma factor4e-68258
NC_010742:1595065:161634716163471617258912Brucella abortus S19 chromosome 1, complete sequenceSigma-70 factor family3e-68258
NC_006932:1596732:161801416180141618925912Brucella abortus biovar 1 str. 9-941 chromosome I, completeRNA polymerase sigma factor3e-68258
NC_007618:1593886:161517016151701616081912Brucella melitensis biovar Abortus 2308 chromosome I, completeSigma-70 factor family:Sigma-70 region 2:Sigma-70 region 43e-68258
NC_009445:1453132:145613414561341457033900Bradyrhizobium sp. ORS 278 chromosome, complete genomeRNA polymerase factor sigma-322e-67255
NC_009952:2752500:277254127725412773437897Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase6e-66251
NC_009485:7021228:704376170437617044660900Bradyrhizobium sp. BTAi1 chromosome, complete genomeRNA polymerase factor sigma-327e-66250
NC_010505:5967324:597047859704785971371894Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-65250
NC_010172:1079127:107912710791271080020894Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor RpoH6e-64244
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH6e-61234
NC_007798:260324:279854279854280720867Neorickettsia sennetsu str. Miyayama, complete genomeRNA polymerase sigma-32 factor6e-58224
NC_013009:270000:291112291112291978867Neorickettsia risticii str. Illinois, complete genomeRNA polymerase sigma-32 factor (RpoH)2e-56219
NC_017249:2073558:207916620791662080077912Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-54213
NC_010814:155834:170098170098170940843Geobacter lovleyi SZ, complete genomeputative RNA polymerase, sigma 70 family subunit2e-51202
NC_014623:4535544:457504845750484575938891Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-b factor2e-51202
NC_008609:112340:130809130809131687879Pelobacter propionicus DSM 2379, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-50198
NC_008601:1151653:115361411536141154492879Francisella tularensis subsp. novicida U112, complete genomeRNA polymerase sigma-32 factor2e-49196
NC_011662:1160887:116325211632521164103852Thauera sp. MZ1T, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-45182
NC_012779:3570720:358928535892853590139855Edwardsiella ictaluri 93-146, complete genomealternative sigma factor RpoH, putative4e-45181
NC_014366:2393702:239507623950762395933858Gamma proteobacterium HdN1, complete genomeRNA polymerase sigma factor1e-44180
NC_009656:475465:480115480115480969855Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA polymerase factor sigma-323e-44179
NC_011891:3004000:301729530172953018263969Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-44178
NC_007404:359764:363361363361364206846Thiobacillus denitrificans ATCC 25259, complete genomesigma-70 factor5e-44178
NC_007760:1415663:141749914174991418467969Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)9e-44177
NC_011742:3799788:381378338137833814637855Escherichia coli S88 chromosome, complete genomeRNA polymerase factor sigma-323e-43175
NC_008563:3888232:389904338990433899897855Escherichia coli APEC O1, complete genomeRNA polymerase sigma factor3e-43175
NC_007946:3855445:386624838662483867102855Escherichia coli UTI89, complete genomecomponent of RNA polymerase, sigma 32 factor3e-43175
NC_013960:2261487:227817022781702279033864Nitrosococcus halophilus Nc4 chromosome, complete genomeRNA polymerase sigma factor RpoH2e-42173
NC_014932:1387818:138931913893191390230912Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma-32 factor1e-42173
NC_015581:1791658:179242117924211793278858Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-42172
NC_008783:119758:141073141073141984912Bartonella bacilliformis KC583, complete genomeRNA polymerase sigma-32 factor4e-42172
NC_004545:15650:266692666927532864Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor1e-41170
NC_010725:4618000:462237446223744623246873Methylobacterium populi BJ001, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-40164
NC_018507:115346:121872121872122714843Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH9e-40164
NC_018677:111500:115439115439116281843Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoH9e-40164
NC_010002:1879220:188397618839761884920945Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-39163
NC_008513:13484:161811618117056876Buchnera aphidicola str. Cc (Cinara cedri), complete genomeRNA polymerase sigma-32 factor2e-36153
NC_015662:15641:174671746718342876Buchnera aphidicola (Cinara tujafilina) chromosome, completeRNA polymerase sigma-32 factor2e-35150
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor3e-31135
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family5e-30131
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS9e-28124
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor1e-27124
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit1e-27124
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS2e-27122
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS3e-27122
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor1e-26120
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD9e-27120
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS8e-27120
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit5e-25115
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family1e-24113
NC_009675:2515669:251566925156692516394726Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH6e-23108
NC_011891:2607812:261038326103832611108726Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-23108
NC_011145:2543321:254626525462652546990726Anaeromyxobacter sp. K, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-23108
NC_007760:1806136:182872918287291829454726Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)5e-23108
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit7e-23107
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-22107
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-22105
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor4e-22105
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor9e-22104
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit2e-21103
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-21103
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative5e-21102
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD5e-21102
NC_020911:349610:353922353922354782861Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma 32 factor RpoH4e-21102
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor4e-21102
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-21102
NC_014330:2457731:245868224586822459626945Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-21102
NC_018607:1185195:118614611861461187072927Brachyspira pilosicoli B2904 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit3e-21102
NC_018604:1385788:138578813857881386714927Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor RpoD3e-21102
NC_019908:748635:781082781082782008927Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-21102
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family3e-21102
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-21101
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor7e-21101
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)2e-20100
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-20100
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor9e-21100
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB9e-21100
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB9e-21100
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD3e-2099.4
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit4e-2099
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor5e-2098.6
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B5e-2098.6
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)7e-2098.2
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit8e-2097.8
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit8e-2097.8
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC8e-2097.8
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit1e-1997.4
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily1e-1997.1
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1997.1
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-1996.7
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A2e-1996.7
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1996.7
NC_013165:2440883:245653524565352457479945Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family2e-1996.7
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1996.3
NC_013510:1849751:1870803187080318724821680Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-1995.9
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor4e-1995.5
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)4e-1995.5
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor5e-1995.1
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family7e-1994.7
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1994.7
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-1994.7
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1894
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily2e-1893.2
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-1893.2
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)3e-1892.4
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor3e-1892.4
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS4e-1892.4
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-1892.4
NC_015167:724934:728042728042728905864Cellulophaga lytica DSM 7489 chromosome, complete genomeRpoD subfamily RNA polymerase sigma 70 subunit6e-1891.7
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family6e-1891.7
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B7e-1891.3
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit8e-1891.3
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily9e-1890.9
NC_015957:8677395:8696862869686286981061245Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit9e-1890.9
NC_009921:5202607:5225702522570252269041203Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1790.9
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-1790.1
NC_011761:2067695:208789920878992088756858Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigm-70 factor family2e-1789.7
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor3e-1789.4
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor5e-1788.6
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD5e-1788.6
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD5e-1788.6
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A5e-1788.6
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD5e-1788.6
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-1788.6
NC_014355:399938:4011424011424024011260Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma-70 factor7e-1788.2
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor6e-1788.2
NC_009074:94000:1169431169431183911449Burkholderia pseudomallei 668 chromosome I, complete sequenceRNA polymerase sigma factor RpoD9e-1787.8
NC_013510:3065000:3081198308119830822801083Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-1687.4
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor1e-1687.4
NC_010118:207843:2067912067912078461056Candidatus Sulcia muelleri GWSS, complete genomeRNA polymerase sigma factor rpoD1e-1687.4
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor1e-1687.4
NC_007651:72952:9341493414948651452Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma factor RpoD1e-1687.4
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-1687.4
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A1e-1687.4
NC_013715:767722:7816667816667830481383Rothia mucilaginosa DY-18, complete genomeDNA-directed RNA polymerase, sigma subunit1e-1687.4
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD1e-1687
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor1e-1687
NC_016789:1432000:1456893145689314584461554Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor A2e-1686.7
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD2e-1686.7
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD3e-1686.3
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit3e-1686.3
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit3e-1686.3
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-1686.3
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD3e-1685.9
NC_009380:1663545:1684802168480216864301629Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor4e-1685.5
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA6e-1685.1
NC_008268:1748635:1757720175772017592821563Rhodococcus sp. RHA1, complete genomesigma factor, sigma 70 type, probable group 25e-1685.1
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor7e-1684.7
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD66e-1684.7
NC_000911:1284552:1301671130167113027801110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor6e-1684.7
NC_017039:1283732:1300698130069813018071110Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeRNA polymerase sigma factor6e-1684.7
NC_017052:1283720:1300686130068613017951110Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeRNA polymerase sigma factor6e-1684.7
NC_017277:1283477:1300488130048813015971110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor6e-1684.7
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor6e-1684.7
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD6e-1684.7
NC_007974:1135863:1146392114639211482451854Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma 70 (RpoD)8e-1684.3
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit8e-1684.3
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD9e-1684.3
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-1584.3
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod1e-1584
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome1e-1583.6
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-1582.8
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD3e-1582.8
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family4e-1582.4
NC_007947:2447635:2479188247918824811221935Methylobacillus flagellatus KT, complete genomesigma 70 (RpoD)4e-1582.4
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor5e-1582
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family5e-1582
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD6e-1581.6
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod6e-1581.6
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD8e-1581.3
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily9e-1580.9
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor1e-1480.9
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor1e-1480.9
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)1e-1480.5
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor1e-1480.5
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB1e-1480.5
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor1e-1480.5
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD1e-1480.5
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-1480.5
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-1480.1
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD2e-1480.1
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD2e-1480.1
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD2e-1480.1
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-1480.1
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD2e-1479.7
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD2e-1479.7
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD3e-1479.3
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD3e-1479.3
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD3e-1479.3
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD3e-1479.3
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)3e-1479.3
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor4e-1479
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD4e-1479
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-1479
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein4e-1479
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD4e-1479
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS5e-1478.6
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD7e-1478.2
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD7e-1478.2
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)1e-1377.4
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD1e-1377.4
NC_009523:2769154:2779011277901127802071197Roseiflexus sp. RS-1 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH1e-1377.4
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-1377.4
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor1e-1377
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD1e-1377
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor2e-1377
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor2e-1377
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-1377
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD2e-1377
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD2e-1377
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD1e-1377
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD1e-1377
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD1e-1377
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD1e-1377
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD1e-1377
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor1e-1377
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD1e-1377
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD1e-1377
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD1e-1377
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein2e-1376.6
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor2e-1376.6
NC_011386:136223:1551691551691563321164Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor RpoD2e-1376.6
NC_015684:362236:3723743723743735401167Oligotropha carboxidovorans OM5 chromosome, complete genome2e-1376.6
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein2e-1376.3
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD2e-1376.3
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-1375.9
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-1375.9
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD3e-1375.9
NC_015138:5046921:5053585505358550562212637Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit5e-1375.5
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily6e-1375.1
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 706e-1375.1
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD5e-1375.1
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor5e-1375.1
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 705e-1375.1
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD7e-1374.7
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-708e-1374.7
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily1e-1273.9
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor7e-1271.6
NC_012806:105133:1119901119901135911602Mycoplasma conjunctivae, complete genomeRNA polymerase sigma factor1e-1170.9
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD2e-1170.1
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD2e-1170.1
NC_014311:1:77257725104482724Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor2e-0963.5
NC_009928:23424:3871638716408092094Acaryochloris marina MBIC11017 plasmid pREB3, complete sequenceRNA polymerase sigma-2 subunit domain protein2e-0963.2
NC_014393:4352216:4355487435548743567701284Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-0963.2
NC_014033:395000:418221418221418937717Prevotella ruminicola 23 chromosome, complete genomeputative sigma factor5e-0962
NC_009926:34848:3484834848360501203Acaryochloris marina MBIC11017 plasmid pREB1, complete sequenceRNA polymerase sigma factor domain protein8e-0961.2
NC_020908:1889759:1893970189397018961262157Octadecabacter arcticus 238, complete genomeputative RNA polymerase sima factor2e-0860.1
NC_007103:198500:211335211335212306972Bacillus cereus E33L plasmid pE33L466, complete sequenceRNA polymerase sigma factor (sigma-A) (sigma-43)3e-0859.3
NC_014172:53815:697826978270753972Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequenceRNA polymerase sigma-43 factor2e-0756.6
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige7e-0754.7
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family9e-0754.3
NC_012438:159927:161195161195161917723Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA polymerase sigma-D factor (Sigma-28)2e-0653.1
NC_014033:395000:400710400710401432723Prevotella ruminicola 23 chromosome, complete genomeRNA polymerase sigma-70 factor family protein2e-0653.1
NC_015707:705628:706734706734707471738Thermotoga thermarum DSM 5069 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG5e-0652
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg5e-0652