Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:3888232 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38874683888235768LivG ATP-binding component of high-affinity branched-chain amino acid transport systemQuickGO ontologyBLASTP
388823238895091278leucineisoleucinevaline transporter subunit LivMQuickGO ontologyBLASTP
38895063890432927high-affinity branched-chain amino acid transport system permease protein LivHQuickGO ontologyBLASTP
389048038915891110leucine transporter subunitQuickGO ontologyBLASTP
38920133892396384hypothetical proteinBLASTP
389258438937441161LeuIleVal-binding protein precursorQuickGO ontologyBLASTP
38946913895023333hypothetical proteinBLASTP
38950303895515486hypothetical proteinBLASTP
38955323896278747hypothetical proteinBLASTP
38962233897125903hypothetical proteinBLASTP
38974173898055639hypothetical proteinBLASTP
38980553898939885hypothetical proteinBLASTP
38990433899897855RNA polymerase sigma factorQuickGO ontologyBLASTP
390014239012271086Cell division protein FtsXQuickGO ontologyBLASTP
39011933901861669cell division ATP-binding protein FtsEQuickGO ontologyBLASTP
390186439033601497cell division protein FtsYQuickGO ontologyBLASTP
39035103904106597putative methyltransferaseQuickGO ontologyBLASTP
39043683904727360hypothetical proteinBLASTP
39048683905494627hypothetical proteinBLASTP
390556839077662199lead cadmium zinc and mercury transporting ATPaseQuickGO ontologyBLASTP