Pre_GI Gene

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Host: NC_014313 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014313:2059933 Hyphomicrobium denitrificans ATCC 51888 chromosome, complete

Host Lineage: Hyphomicrobium denitrificans; Hyphomicrobium; Hyphomicrobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Temp: Mesophile. An aerobic, motile Gram-negative bacterium. Hyphomicrobium denitrificans has a biphasic life style, which consists of a motile phase of flagellated swarmer cells, and a cessile phase in which a long prosthecate is produced at one end of the bacteria through which budding cells emerge. Newly budded cells in turn produce flagella and go through a motile phase and the cycle continues. These organisms can colonize the surfaces of marine environments which enables additional species to colonize at later stages. This organism is also able to utilize methanol as a sole source of energy.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
205993320612041272cell wall hydrolaseautolysinQuickGO ontologyBLASTP
20618912062868978diacylglycerol kinase catalytic regionQuickGO ontologyBLASTP
20629442063834891RNA polymerase sigma 32 subunit RpoHQuickGO ontologyBLASTP
206402320650571035pseudouridine synthase RluA familyQuickGO ontologyBLASTP
20650942065468375hypothetical protein
2065628206570376tRNA-GluQuickGO ontology
20661532066557405hypothetical protein
20669612067746786periplasmic protein-like proteinQuickGO ontologyBLASTP
20677742068601828protein of unknown function DUF344QuickGO ontologyBLASTP
206875120698121062calciumproton antiporter CaCA familyQuickGO ontologyBLASTP
206982820716241797sulfate transporterQuickGO ontologyBLASTP
207208220743312250hypothetical proteinBLASTP
20743732074801429hypothetical proteinBLASTP
20748232075782960Phosphate acetyltransferaseQuickGO ontologyBLASTP
207578620769941209acetate kinaseQuickGO ontologyBLASTP
20769912077773783enoyl-acyl carrier protein reductaseQuickGO ontologyBLASTP
20779552078374420UspA domain proteinQuickGO ontologyBLASTP
207850320816523150transporter hydrophobeamphiphile efflux-1 HAE1 familyQuickGO ontologyBLASTP
208165720827691113efflux transporter RND family MFP subunitQuickGO ontologyBLASTP