Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:3799788 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
379978838011041317glycerol-3-phosphate transporter periplasmic binding proteinQuickGO ontologyBLASTP
38015013802214714leucineisoleucinevaline transporter ATP-binding subunitQuickGO ontologyBLASTP
38022163802983768leucineisoleucinevaline transporter ATP-binding subunitQuickGO ontologyBLASTP
380298038042571278leucineisoleucinevaline transporter permease subunitQuickGO ontologyBLASTP
38042543805180927branched-chain amino acid transporter permease subunit LivHQuickGO ontologyBLASTP
380522838063371110leucine ABC transporter subunit substrate-binding proteinQuickGO ontologyBLASTP
38067613807144384hypothetical proteinBLASTP
380733238084351104leucineisoleucinevaline transporter subunit periplasmic-binding component of ABC superfamilyQuickGO ontologyBLASTP
38093703809771402PTS system mannosefructose-specific transporter subunit IIAQuickGO ontologyBLASTP
38097783810263486PTS system mannosefructose-specific transporter subunit IIAQuickGO ontologyBLASTP
38102803811026747phosphotransferase system enzyme IICQuickGO ontologyBLASTP
38109473811873927phosphotransferase system enzyme IIDQuickGO ontologyBLASTP
38118453812795951Phosphoglycerate dehydrogenaseQuickGO ontologyBLASTP
38127953813679885dihydrodipicolinate synthaseQuickGO ontologyBLASTP
38137833814637855RNA polymerase factor sigma-32QuickGO ontologyBLASTP
381488238159401059cell division protein FtsXQuickGO ontologyBLASTP
38159333816601669cell division protein FtsEQuickGO ontologyBLASTP
381660438181001497cell division protein FtsYQuickGO ontologyBLASTP
3818250381884659716S rRNA m2G966-methyltransferaseQuickGO ontologyBLASTP
38187133819105393hypothetical proteinBLASTP
38191083819467360hypothetical proteinBLASTP
38196083820234627hypothetical proteinBLASTP
382030838225062199zinccadmiummercurylead-transporting ATPaseQuickGO ontologyBLASTP