Pre_GI: BLASTP Hits

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Query: NC_013198:394000:403139 Lactobacillus rhamnosus GG, complete genome

Start: 403139, End: 403807, Length: 669

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012488:349862:373201373201373857657Listeria monocytogenes Clip81459, complete genomeputative translaldolase3e-78291
NC_012846:2154000:217336821733682174021654Bartonella grahamii as4aup, complete genometransaldolase9e-68256
NC_018000:1914945:196482519648251965478654Sinorhizobium fredii USDA 257 chromosome, complete genometransaldolase Tal2e-67255
NC_014932:1387818:140916114091611409814654Bartonella clarridgeiae 73, complete genometransaldolase2e-67255
NC_015555:2259500:229877022987702299417648Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetransaldolase3e-67254
NC_019970:2551607:257046225704622571109648Thermoanaerobacterium thermosaccharolyticum M0795, complete genomefructose-6-phosphate aldolase, TalC/MipB family4e-67254
NC_008783:119758:120668120668121321654Bartonella bacilliformis KC583, complete genomeTransaldolase6e-67253
NC_015687:1478668:149181414918141492461648Clostridium acetobutylicum DSM 1731 chromosome, complete genomeputative translaldolase1e-66252
NC_009633:337706:357195357195357839645Alkaliphilus metalliredigens QYMF chromosome, complete genomeputative transaldolase2e-65248
NC_006274:659922:676248676248676895648Bacillus cereus E33L, complete genometransaldolase1e-64246
NC_003997:674265:687916687916688563648Bacillus anthracis str. Ames, complete genometransaldolase1e-64246
NC_005945:674337:687812687812688459648Bacillus anthracis str. Sterne, complete genometransaldolase1e-64246
NC_005957:667954:678799678799679446648Bacillus thuringiensis serovar konkukian str. 97-27, completetransaldolase1e-64246
NC_007530:674265:687917687917688564648Bacillus anthracis str. 'Ames Ancestor', complete genometransaldolase1e-64246
NC_011725:681387:691786691786692433648Bacillus cereus B4264 chromosome, complete genometranslaldolase1e-64246
NC_011773:688689:702354702354703001648Bacillus cereus AH820 chromosome, complete genomeputative translaldolase1e-64246
NC_012659:678289:687817687817688464648Bacillus anthracis str. A0248, complete genomeputative translaldolase1e-64246
NC_016779:657568:669327669327669974648Bacillus cereus F837/76 chromosome, complete genomeTransaldolase1e-64246
NC_004722:650950:661348661348661995648Bacillus cereus ATCC 14579, complete genometransaldolase7e-65246
NC_011969:726369:737213737213737860648Bacillus cereus Q1 chromosome, complete genometranslaldolase4e-64244
NC_016771:701909:715573715573716220648Bacillus cereus NC7401, complete genometransaldolase4e-64244
NC_017208:671128:683863683863684510648Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeputative translaldolase3e-64244
NC_014972:544146:546859546859547503645Desulfobulbus propionicus DSM 2032 chromosome, complete genometransaldolase1e-63243
NC_009952:1984955:201483120148312015484654Dinoroseobacter shibae DFL 12, complete genometransaldolase9e-64243
NC_010184:661226:672984672984673631648Bacillus weihenstephanensis KBAB4, complete genomeputative transaldolase8e-64243
NC_011772:647778:659693659693660340648Bacillus cereus G9842, complete genomeputative transaldolase8e-64243
NC_013316:2585666:260409326040932604743651Clostridium difficile R20291, complete genomeputative transaldolase4e-63241
NC_013315:2505792:252353725235372524187651Clostridium difficile CD196 chromosome, complete genometranslaldolase4e-63241
NC_017179:2513804:253154925315492532199651Clostridium difficile BI1, complete genomeputative translaldolase4e-63241
NC_016023:1538000:155779115577911558438648Bacillus coagulans 36D1 chromosome, complete genometransaldolase4e-63241
NC_012581:1075663:108565110856511086319669Bacillus anthracis str. CDC 684 chromosome, complete genomeputative translaldolase2e-63241
NC_008262:784878:805105805105805752648Clostridium perfringens SM101, complete genometransaldolase, putative2e-62238
NC_008025:1152594:117288211728821173622741Deinococcus geothermalis DSM 11300, complete genometransaldolase, putative1e-61236
NC_013642:942767:974130974130974786657Thermotoga naphthophila RKU-10, complete genometransaldolase2e-61235
NC_010483:642577:645471645471646127657Thermotoga sp. RQ2, complete genometransaldolase2e-61235
NC_015499:417896:431727431727432380654Thermodesulfobium narugense DSM 14796 chromosome, complete genometransaldolase3e-61234
NC_012225:2247796:226551122655112266164654Brachyspira hyodysenteriae WA1, complete genometransaldolase6e-61233
NC_017243:3093393:309541330954133096066654Brachyspira intermedia PWS/A chromosome, complete genometransaldolase8e-61233
NC_014831:149626:171530171530172216687Thermaerobacter marianensis DSM 12885 chromosome, complete genometransaldolase1e-60233
NC_014507:1403000:141399614139961414640645Methanoplanus petrolearius DSM 11571 chromosome, complete genometransaldolase6e-60230
NC_020291:5093138:510152751015275102180654Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative transaldolase Tal9e-60229
NC_009615:3581619:358856035885603589216657Parabacteroides distasonis ATCC 8503 chromosome, complete genometranslaldolase4e-58224
NC_015966:521703:523804523804524475672Rhodothermus marinus SG0.5JP17-172 chromosome, complete genometransaldolase1e-57222
NC_009616:1604276:160774616077461608396651Thermosipho melanesiensis BI429 chromosome, complete genomeputative translaldolase2e-57221
NC_015160:2191919:219809721980972198753657Odoribacter splanchnicus DSM 20712 chromosome, complete genometransaldolase7e-57220
NC_014738:55782:612416124161894654Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,transaldolase1e-56219
NC_019903:3537545:355473135547313555372642Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,transaldolase1e-55215
NC_014377:1400544:140573314057331406380648Thermosediminibacter oceani DSM 16646 chromosome, complete genometransaldolase2e-55215
NC_010003:1242846:124465612446561245321666Petrotoga mobilis SJ95, complete genometransaldolase7e-55213
NC_016776:3626541:363052236305223631178657Bacteroides fragilis 638R, complete genomeputative transaldolase5e-53207
NC_003228:3582728:358505535850553585711657Bacteroides fragilis NCTC 9343, complete genometransaldolase7e-53207
NC_007798:652317:678060678060678704645Neorickettsia sennetsu str. Miyayama, complete genomeputative transaldolase2e-52205
NC_010981:1243888:124774412477441248388645Wolbachia pipientis, complete genometransaldolase2e-52205
NC_013009:689978:695990695990696634645Neorickettsia risticii str. Illinois, complete genometransaldolase, putative6e-52203
NC_017297:3752000:375470437547043755381678Clostridium botulinum F str. 230613 chromosome, complete genomeputative transaldolase2e-45182
NC_009699:3753599:375609137560913756768678Clostridium botulinum F str. Langeland chromosome, complete genometransaldolase2e-45182
NC_010520:3753875:375387537538753754552678Clostridium botulinum A3 str. Loch Maree, complete genomeputative transaldolase2e-45182
NC_012658:3744000:374417537441753744852678Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative transaldolase6e-45180
NC_010516:3724312:372431237243123724989678Clostridium botulinum B1 str. Okra, complete genomeputative transaldolase1e-44179
NC_009697:3629250:362925036292503629927678Clostridium botulinum A str. ATCC 19397 chromosome, completetransaldolase4e-44177
NC_009698:3526359:352635935263593527036678Clostridium botulinum A str. Hall chromosome, complete genometransaldolase4e-44177
NC_014363:114239:173373173373174053681Olsenella uli DSM 7084 chromosome, complete genometransaldolase1e-41169
NC_012691:2050957:206568320656832066366684Tolumonas auensis DSM 9187, complete genomeTransaldolase4e-35148
NC_011978:1500663:150528915052891505957669Thermotoga neapolitana DSM 4359, complete genomeFructose-6-phosphate aldolase7e-35147
NC_013364:928486:952535952535953197663Escherichia coli O111:H- str. 11128, complete genomefructose-6-phosphate aldolase 18e-30130
NC_013353:922937:948264948264948926663Escherichia coli O103:H2 str. 12009, complete genomefructose-6-phosphate aldolase 18e-30130
AP010958:922937:948264948264948926663Escherichia coli O103:H2 str. 12009 DNA, complete genomefructose-6-phosphate aldolase 18e-30130
NC_015424:2917817:293676029367602937413654Aeromonas veronii B565 chromosome, complete genometransaldolase1e-29129
NC_013517:2055071:206068320606832061366684Sebaldella termitidis ATCC 33386, complete genomeTransaldolase6e-29127
NC_014328:2872721:287348828734882874165678Clostridium ljungdahlii ATCC 49587 chromosome, complete genometransaldolase2e-28125
NC_015703:234960:2514242514242524311008Runella slithyformis DSM 19594 chromosome, complete genomeCBS domain-containing protein2e-26119
NC_004668:3184319:318629231862923186969678Enterococcus faecalis V583, complete genomefructose-6-phosphate aldolase4e-25114
NC_016938:193000:215645215645216331687Melissococcus plutonius DAT561 chromosome 1, complete genometransaldolase5e-24110
NC_011134:1854868:187233918723391873007669Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeprobable fructose-6-phosphate aldolase Fsa4e-23108
NC_002737:1670164:170479617047961705464669Streptococcus pyogenes M1 GAS, complete genomefructose-6-phosphate aldolase4e-23108
NC_008023:1707021:172758717275871728255669Streptococcus pyogenes MGAS2096, complete genomeTransaldolase4e-22104
NC_007930:180281:181337181337182017681Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Transaldolase1e-21103
NC_007645:2408125:241334324133432414302960Hahella chejuensis KCTC 2396, complete genometransaldolase2e-1892.8
NC_009925:1617414:162412316241231624773651Acaryochloris marina MBIC11017, complete genometransaldolase, putative5e-1890.9
NC_004129:2201780:220484522048452205771927Pseudomonas fluorescens Pf-5, complete genometransaldolase3e-1685.1
NC_017328:2586171:260429926042992605249951Shigella flexneri 2002017 chromosome, complete genomeTransaldolase2e-1582.8
NC_004741:2526421:254479425447942545744951Shigella flexneri 2a str. 2457T, complete genometransaldolase2e-1582.8
NC_008258:2542863:256247525624752563425951Shigella flexneri 5 str. 8401, complete genometransaldolase A2e-1582.8
NC_020209:945000:950220950220951146927Pseudomonas poae RE*1-1-14, complete genometransaldolase B2e-1582.4
NC_004337:2548288:256666125666612567611951Shigella flexneri 2a str. 301, complete genometransaldolase2e-1582.4
NC_013959:1195249:119719211971921198145954Sideroxydans lithotrophicus ES-1 chromosome, complete genometransaldolase6e-1580.9
NC_020299:149118:155462155462156415954Candidatus Kinetoplastibacterium oncopeltii TCC290E, completetransaldolase6e-1580.9
NC_015733:1943385:194544219454421946368927Pseudomonas putida S16 chromosome, complete genometransaldolase8e-1580.5
NC_010501:1868888:187266118726611873587927Pseudomonas putida W619, complete genometransaldolase8e-1580.5
NC_014837:3126543:312918631291863130136951Pantoea sp. At-9b chromosome, complete genometransaldolase1e-1480.1
NC_015408:1035690:105617710561771057160984Chlamydophila pecorum E58 chromosome, complete genometransaldolase1e-1480.1
NC_019815:782987:785703785703786656954Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneitransaldolase2e-1479.3
NC_016612:2223357:222584222258422226795954Klebsiella oxytoca KCTC 1686 chromosome, complete genometransaldolase B3e-1479
NC_008027:3953951:396983739698373970763927Pseudomonas entomophila L48, complete genometransaldolase3e-1479
NC_006841:750000:757439757439758389951Vibrio fischeri ES114 chromosome II, complete sequencetransaldolase2e-1479
NC_007948:4558000:458933845893384590300963Polaromonas sp. JS666, complete genometransaldolase2e-1479
NC_019814:320260:326623326623327576954Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonastransaldolase2e-1479
NC_011186:819828:830370830370831320951Vibrio fischeri MJ11 chromosome II, complete sequencetransaldolase3e-1478.6
NC_016902:4081484:410143341014334102386954Escherichia coli KO11FL chromosome, complete genometransaldolase3e-1478.6
NC_012947:3753375:377453337745333775486954Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransaldolase B3e-1478.6
CP002516:4081484:410143341014334102386954Escherichia coli KO11, complete genometransaldolase3e-1478.6
NC_010468:3970995:399311039931103994063954Escherichia coli ATCC 8739, complete genometransaldolase3e-1478.6
NC_016830:4639388:465499446549944655920927Pseudomonas fluorescens F113 chromosome, complete genometransaldolase b4e-1478.2
NC_014532:3479674:348413434841343485081948Halomonas elongata DSM 2581, complete genometransaldolase6e-1477.8
NC_015761:2444833:244738424473842448334951Salmonella bongori NCTC 12419, complete genometransaldolase A6e-1477.8
NC_013851:2610847:263174726317472632718972Allochromatium vinosum DSM 180 chromosome, complete genometransaldolase1e-1377
NC_007775:723925:7300867300867312641179Synechococcus sp. JA-3-3Ab, complete genometransaldolase2e-1375.9
NC_008309:190550:190550190550191503954Haemophilus somnus 129PT, complete genometransaldolase3e-1375.5
NC_000911:240863:2604632604632616381176Synechocystis sp. PCC 6803, complete genometransaldolase3e-1375.1
NC_017039:240863:2604632604632616381176Synechocystis sp. PCC 6803 substr. PCC-P, complete genometransaldolase3e-1375.1
NC_017052:240851:2604512604512616261176Synechocystis sp. PCC 6803 substr. PCC-N, complete genometransaldolase3e-1375.1
NC_017277:240863:2604632604632616381176Synechocystis sp. PCC 6803, complete genometransaldolase3e-1375.1
NC_008149:402599:409369409369410361993Yersinia pestis Nepal516, complete genometransaldolase B9e-1373.9
NC_004088:4116676:412744641274464128438993Yersinia pestis KIM, complete genometransaldolase9e-1373.9
NC_014029:536000:543658543658544650993Yersinia pestis Z176003 chromosome, complete genometransaldolase9e-1373.9
NC_003143:483395:490204490204491157954Yersinia pestis CO92, complete genometransaldolase7e-1373.9
NC_010159:809663:821474821474822427954Yersinia pestis Angola, complete genometransaldolase7e-1373.9
NC_010465:3958766:396954639695463970499954Yersinia pseudotuberculosis YPIII, complete genometransaldolase7e-1373.9
NC_005810:4224500:423388142338814234834954Yersinia pestis biovar Microtus str. 91001, complete genometransaldolase B7e-1373.9
NC_009381:3596000:360788036078803608833954Yersinia pestis Pestoides F chromosome, complete genometransaldolase B7e-1373.9
NC_009708:3903598:391436939143693915322954Yersinia pseudotuberculosis IP 31758 chromosome, complete genometransaldolase B7e-1373.9
NC_017154:478000:485848485848486801954Yersinia pestis D106004 chromosome, complete genometransaldolase7e-1373.9
NC_017160:479411:488039488039488992954Yersinia pestis D182038 chromosome, complete genometransaldolase7e-1373.9
NC_017168:601928:612698612698613651954Yersinia pestis A1122 chromosome, complete genometransaldolase B7e-1373.9
NC_017265:3982020:399279039927903993743954Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transaldolase B7e-1373.9
NC_008150:4561633:456842645684264569394969Yersinia pestis Antiqua, complete genometransaldolase B7e-1373.9
NC_006155:713174:717504717504718457954Yersinia pseudotuberculosis IP 32953, complete genometransaldolase7e-1373.9
NC_012917:833721:870845870845871795951Pectobacterium carotovorum subsp. carotovorum PC1, complete genometransaldolase9e-1373.6
NC_016632:170000:185086185086186039954Serratia symbiotica str. 'Cinara cedri' chromosome, completetransaldolase B2e-1272.8
NC_009617:3184924:318572631857263186442717Clostridium beijerinckii NCIMB 8052 chromosome, complete genometranslaldolase2e-1272.4
NC_013421:1038500:105658610565861057536951Pectobacterium wasabiae WPP163, complete genometransaldolase6e-1270.9
NC_008752:1025980:102768710276871028634948Acidovorax avenae subsp. citrulli AAC00-1, complete genometransaldolase6e-1270.9
NC_013198:394000:420195420195420905711Lactobacillus rhamnosus GG, complete genometranslaldolase3e-1065.1
NC_012785:638000:655858655858656505648Kosmotoga olearia TBF 19.5.1, complete genomeTransaldolase5e-0857.8
NC_010003:1746319:174771217477121748359648Petrotoga mobilis SJ95, complete genomeTransaldolase-like protein2e-0755.8
NC_008699:1247423:1248186124818612493011116Nocardioides sp. JS614, complete genomeTransaldolase3e-0652