Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3753375 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
37533753753824450peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP
37539493754443495lipoprotein signal peptidaseQuickGO ontologyBLASTP
375444337572592817isoleucyl-tRNA synthetaseQuickGO ontologyBLASTP
37573023758243942bifunctional riboflavin kinaseFMN adenylyltransferaseQuickGO ontologyBLASTP
37582513758469219hypothetical proteinBLASTP
3758572375883526430S ribosomal protein S20QuickGO ontologyBLASTP
37596793760182504IS1 transposaseQuickGO ontologyBLASTP
37601013760376276Insertion element proteinQuickGO ontologyBLASTP
37631053764064960hypothetical proteinBLASTP
37641033765002900transcriptional activator NhaRQuickGO ontologyBLASTP
376506837662341167pH-dependent sodiumproton antiporterQuickGO ontologyBLASTP
37668213766973153Hokgef cell toxic proteinQuickGO ontologyBLASTP
37670043767144141hypothetical proteinBLASTP
376716737682791113transposase IS4 family proteinQuickGO ontologyBLASTP
376842637695561131chaperone protein DnaJQuickGO ontologyBLASTP
376964537715611917molecular chaperone DnaKQuickGO ontologyBLASTP
37719383772342405hypothetical proteinBLASTP
37723683773081714hypothetical proteinBLASTP
37732303773796567hypothetical proteinBLASTP
37738313774418588molybdenum cofactor biosynthesis protein MogAQuickGO ontologyBLASTP
37745333775486954transaldolase BQuickGO ontologyBLASTP