Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:4639388 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
463938846407461359ChrA proteinQuickGO ontologyBLASTP
46407434640946204gcn5-related n-acetyltransferaseQuickGO ontology
46413104641798489hypothetical protein
464200646431691164arabinose efflux permeaseQuickGO ontologyBLASTP
464347446445231050alcohol dehydrogenaseQuickGO ontologyBLASTP
46448514645618768araC family transcriptional regulatorQuickGO ontologyBLASTP
464568546471811497aspartate racemaseQuickGO ontologyBLASTP
464719246484541263protonglutamate symport protein Sodiumglutamate symport proteinQuickGO ontologyBLASTP
46487174649664948hypothetical proteinBLASTP
46498564650131276hypothetical proteinBLASTP
46507784650948171hypothetical protein
46509484651547600cell filamentation protein ficQuickGO ontologyBLASTP
46516404652362723phosphoprotein phosphataseQuickGO ontologyBLASTP
46530434653699657hypothetical proteinBLASTP
46538774654815939tRNA dihydrouridine synthase AQuickGO ontologyBLASTP
46549944655920927transaldolase bQuickGO ontologyBLASTP
46561464656628483protein StaSQuickGO ontologyBLASTP
465662846578091182protein RsbUQuickGO ontologyBLASTP
46581554658844690VacJ-like lipoprotein precursorQuickGO ontologyBLASTP
46590474659667621phosphonoacetaldehyde phosphonohydrolase-related proteinQuickGO ontologyBLASTP
46597774660040264Chromosome segregation ATPaseQuickGO ontologyBLASTP
46602264661056831NADPH dependent preQ0 reductaseQuickGO ontologyBLASTP
46611184661663546copper-binding proteinQuickGO ontologyBLASTP
46618214662501681protein CusRQuickGO ontologyBLASTP
466249846638501353protein CusSQuickGO ontologyBLASTP