Pre_GI: BLASTP Hits

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Query: NC_016830:4639388:4645685 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4645685, End: 4647181, Length: 1497

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000961:597385:597385597385598071687Pyrococcus horikoshii OT3, complete genomeaspartate racemase7e-44178
NC_009142:5647737:565601356560135656768756Saccharopolyspora erythraea NRRL 2338, complete genomeaspartate racemase8e-38158
NC_011295:1120584:112754711275471128266720Coprothermobacter proteolyticus DSM 5265, complete genomeaspartate racemase7e-37155
NC_010498:1094000:110588911058891106608720Escherichia coli SMS-3-5, complete genomeaspartate racemase1e-33145
NC_014500:1646854:166670616667061667422717Dickeya dadantii 3937 chromosome, complete genomeputative aspartate racemase4e-31136
NC_014618:4657719:468570046857004686434735Enterobacter cloacae SCF1 chromosome, complete genomeaspartate racemase2e-30134
NC_015761:4355335:437758243775824378316735Salmonella bongori NCTC 12419, complete genomeaspartate racemase2e-29130
NC_012125:4716000:474932047493204750054735Salmonella enterica subsp. enterica serovar Paratyphi C strainaspartate racemase1e-27124
NC_006905:4638707:467200546720054672739735Salmonella enterica subsp. enterica serovar Choleraesuis strputative aspartate racemase1e-27124
NC_002929:52500:536235362354357735Bordetella pertussis Tohama I, complete genomeputative aspartate/glutamate racemase2e-25117
NC_017223:51180:536235362354357735Bordetella pertussis CS chromosome, complete genomeputative aspartate/glutamate racemase2e-25117
NC_015677:1460000:146540814654081466145738Ramlibacter tataouinensis TTB310 chromosome, complete genomeaspartate racemase1e-25117
NC_013421:1954915:195752019575201958236717Pectobacterium wasabiae WPP163, complete genomeaspartate racemase1e-24114
NC_007948:4620661:462609346260934626818726Polaromonas sp. JS666, complete genomeAspartate racemase2e-21104
NC_009725:496443:528210528210528890681Bacillus amyloliquefaciens FZB42, complete genomeRacX2e-1687.4
NC_014551:483773:493886493886494566681Bacillus amyloliquefaciens DSM 7, complete genomeamino acid racemase2e-1584.7
NC_017190:466236:479815479815480495681Bacillus amyloliquefaciens LL3 chromosome, complete genomeamino acid racemase2e-1584.7
NC_019842:484933:522218522218522898681Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,aspartate racemase2e-1584.3
NC_020272:3396800:342665734266573427337681Bacillus amyloliquefaciens IT-45, complete genomeaspartate racemase2e-1584
NC_017191:467207:487387487387488067681Bacillus amyloliquefaciens XH7 chromosome, complete genomeamino acid racemase8e-1582.4
NC_017188:461177:481365481365482045681Bacillus amyloliquefaciens TA208 chromosome, complete genomeaspartate racemase8e-1582.4
NC_020410:495184:514630514630515310681Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative amino-acid racemase1e-1482
NC_011883:1182000:119259811925981193314717Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,aspartate racemase4e-1376.6
NC_016048:3611146:362779336277933628488696Oscillibacter valericigenes Sjm18-20, complete genomeaspartate racemase5e-1169.7
NC_003413:1521080:155854015585401559235696Pyrococcus furiosus DSM 3638, complete genomeputative aspartate racemase1e-1068.6
NC_014551:2510000:254602625460262546724699Bacillus amyloliquefaciens DSM 7, complete genomeAspartate racemase2e-1067.8
NC_020410:2509057:251292025129202513618699Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative aspartate racemase4e-1066.6
NC_008392:1029134:105709610570961057800705Burkholderia cepacia AMMD chromosome 3, complete sequenceaspartate racemase1e-0965.1
NC_013446:2062862:207646020764602077155696Comamonas testosteroni CNB-2, complete genomeaspartate racemase3e-0963.9
NC_021182:554000:564461564461565159699Clostridium pasteurianum BC1, complete genomeaspartate racemase7e-0962.4
NC_021182:2536000:255080925508092551507699Clostridium pasteurianum BC1, complete genomeaspartate racemase7e-0962.4
NC_011026:1681852:169944916994491700183735Chloroherpeton thalassium ATCC 35110, complete genomeaspartate racemase1e-0862
NC_016609:6750111:678376867837686784457690Niastella koreensis GR20-10 chromosome, complete genomeaspartate racemase1e-0861.6
NC_013192:1824174:182969618296961830391696Leptotrichia buccalis DSM 1135, complete genomeaspartate racemase1e-0861.6
NC_014011:1264165:127799512779951278681687Aminobacterium colombiense DSM 12261 chromosome, complete genomeaspartate racemase3e-0860.8
NC_014006:924417:936197936197936892696Sphingobium japonicum UT26S chromosome 1, complete genomeputative aspartate/glutamate racemase9e-0858.9
NC_010557:679656:725608725608726225618Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceaspartate racemase1e-0758.5
NC_012881:3520956:353218835321883532877690Desulfovibrio salexigens DSM 2638, complete genomeaspartate racemase1e-0758.5
NC_013517:4208939:423640342364034237098696Sebaldella termitidis ATCC 33386, complete genomeaspartate racemase3e-0653.5
NC_009712:2092440:210683321068332107555723Candidatus Methanoregula boonei 6A8, complete genomeaspartate racemase5e-0652.8
NC_007086:2887875:296496129649612965665705Xanthomonas campestris pv. campestris str. 8004, complete genomeputative resistance protein9e-0652
NC_015681:401084:407809407809408528720Thermodesulfatator indicus DSM 15286 chromosome, complete genomeaspartate racemase1e-0552