Pre_GI: BLASTP Hits

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Query: NC_016830:4639388:4658155 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4658155, End: 4658844, Length: 690

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:945000:947124947124947813690Pseudomonas poae RE*1-1-14, complete genomeVacJ family lipoprotein4e-108390
NC_004129:2201780:220178022017802202466687Pseudomonas fluorescens Pf-5, complete genomevacJ lipoprotein7e-107386
NC_008027:3953951:397513139751313975838708Pseudomonas entomophila L48, complete genomeVacJ lipoprotein1e-101369
NC_014323:4665610:466876846687684669508741Herbaspirillum seropedicae SmR1 chromosome, complete genomesurface lipoprotein (VacJ) transmembrane protein2e-43175
NC_008463:1912348:194172519417251942528804Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative surface lipoprotein2e-41169
NC_015497:1287877:130440113044011305168768Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeVacJ family lipoprotein4e-41167
NC_010805:2432167:2434793243479324358061014Burkholderia multivorans ATCC 17616 chromosome 2, completelipoprotein2e-40165
NC_010086:20876:3949839498405111014Burkholderia multivorans ATCC 17616 chromosome 2, completeVacJ family lipoprotein2e-40165
NC_010410:3166279:317812331781233179022900Acinetobacter baumannii AYE, complete genomeputative lipoprotein precursor (VacJ) transmembrane3e-36151
NC_010611:679862:685475685475686374900Acinetobacter baumannii ACICU, complete genomeSurface lipoprotein3e-36151
NC_007517:1107408:1107408110740811096512244Geobacter metallireducens GS-15, complete genomeVacJ-like lipoprotein3e-35148
NC_009465:813816:835643835643836329687Candidatus Vesicomyosocius okutanii HA, complete genomesurface lipoprotein VacJ3e-33142
NC_011761:1838000:186490318649031865742840Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completevacJ lipoprotein3e-33141
NC_008577:1579950:158362215836221584407786Shewanella sp. ANA-3 chromosome 1, complete sequenceVacJ family lipoprotein2e-31135
NC_014315:2239725:225090222509022251669768Nitrosococcus watsoni C-113 chromosome, complete genomeVacJ family lipoprotein3e-31135
NC_009092:1599526:160428416042841605066783Shewanella loihica PV-4, complete genomeVacJ family lipoprotein6e-31134
NC_009665:3460906:348990934899093490694786Shewanella baltica OS185 chromosome, complete genomeVacJ family lipoprotein4e-30131
NC_008700:2701500:273460327346032735433831Shewanella amazonensis SB2B, complete genomevacJ lipoprotein, putative3e-30131
NC_011663:1709003:170900317090031709788786Shewanella baltica OS223 chromosome, complete genomeVacJ family lipoprotein1e-29129
NC_009714:265098:284347284347285039693Campylobacter hominis ATCC BAA-381, complete genomeVacJ family lipoprotein8e-29127
NC_010338:1394550:141272914127291413508780Caulobacter sp. K31, complete genomeVacJ family lipoprotein2e-28125
NC_010581:2943913:296051829605182961330813Beijerinckia indica subsp. indica ATCC 9039, complete genomeVacJ family lipoprotein4e-27121
NC_015581:1891409:190496119049611905770810Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeVacJ family lipoprotein4e-27121
NC_016818:1291665:131425313142531315020768Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesurface lipoprotein7e-27120
NC_014166:2498500:254225725422572542994738Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeVacJ family lipoprotein1e-26119
NC_013421:1545386:155707315570731557834762Pectobacterium wasabiae WPP163, complete genomeVacJ family lipoprotein6e-25114
NC_014618:1452927:146379314637931464548756Enterobacter cloacae SCF1 chromosome, complete genomeVacJ family lipoprotein5e-25114
NC_015663:5253242:525890052589005259661762Enterobacter aerogenes KCTC 2190 chromosome, complete genomeABC transporter outer membrane lipoprotein5e-25114
NC_012917:3198000:320157032015703202331762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeVacJ family lipoprotein1e-24113
NC_010694:1250841:127236812723681273129762Erwinia tasmaniensis, complete genomeLipoprotein1e-24113
NC_009436:3117661:312331931233193124071753Enterobacter sp. 638, complete genomeVacJ family lipoprotein2e-24112
NC_010473:2548946:255403925540392554794756Escherichia coli str. K-12 substr. DH10B, complete genomepredicted lipoprotein2e-24112
AC_000091:2462461:246969824696982470453756Escherichia coli W3110 DNA, complete genomepredicted lipoprotein2e-24112
NC_000913:2455037:246227424622742463029756Escherichia coli K12, complete genomepredicted lipoprotein2e-24112
NC_012759:2342986:234807923480792348834756Escherichia coli BW2952 chromosome, complete genomeputative lipoprotein2e-24112
NC_009800:2505872:250587225058722506627756Escherichia coli HS, complete genomelipoprotein, VacJ family5e-24111
NC_010658:2529033:253020625302062530961756Shigella boydii CDC 3083-94, complete genomelipoprotein, VacJ family5e-24111
NC_011748:2655989:266322526632252663980756Escherichia coli 55989, complete genomeputative lipoprotein5e-24111
NC_007613:2376974:237813823781382378893756Shigella boydii Sb227, complete genomelipoprotein precursor5e-24111
CU928145:2655989:266322526632252663980756Escherichia coli 55989 chromosome, complete genomeputative lipoprotein5e-24111
CP002185:2608000:261599926159992616754756Escherichia coli W, complete genomepredicted lipoprotein5e-24111
NC_002655:3260500:326080732608073261562756Escherichia coli O157:H7 EDL933, complete genomelipoprotein precursor5e-24111
NC_013716:2898434:290202529020252902780756Citrobacter rodentium ICC168, complete genomelipoprotein5e-24111
NC_002695:3189425:319085131908513191606756Escherichia coli O157:H7 str. Sakai, complete genomelipoprotein precursor5e-24111
CP002516:1475521:148910314891031489858756Escherichia coli KO11, complete genomeVacJ family lipoprotein5e-24111
NC_011742:2489000:249106224910622491817756Escherichia coli S88 chromosome, complete genomelipoprotein4e-24111
NC_008563:2565876:256793025679302568685756Escherichia coli APEC O1, complete genomeputative lipoprotein VacJ4e-24111
NC_007946:2593500:259524025952402595995756Escherichia coli UTI89, complete genomeVacJ lipoprotein precursor4e-24111
NC_015968:3277217:328296032829603283712753Enterobacter asburiae LF7a chromosome, complete genomeVacJ family lipoprotein4e-24111
NC_016902:1475521:148910314891031489858756Escherichia coli KO11FL chromosome, complete genomeVacJ family lipoprotein5e-24111
NC_013941:2928000:293191729319172932672756Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipoprotein, VacJ family5e-24111
NC_013361:3254000:326207232620723262827756Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipoprotein5e-24111
NC_011415:2732000:273937427393742740129756Escherichia coli SE11 chromosome, complete genomelipoprotein precursor5e-24111
NC_011750:2585015:258644125864412587196756Escherichia coli IAI39 chromosome, complete genomeputative lipoprotein6e-24110
NC_004631:531254:545225545225545980756Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVacJ lipoprotein precursor1e-23109
NC_003198:2453074:245873224587322459487756Salmonella enterica subsp. enterica serovar Typhi str. CT18,VacJ lipoprotein precursor1e-23109
NC_006511:529424:543396543396544151756Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCVacJ lipoprotein precursor1e-23109
NC_011083:2542876:254853325485332549288756Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipoprotein, VacJ family1e-23109
NC_011147:529458:543430543430544185756Salmonella enterica subsp. enterica serovar Paratyphi A strVacJ lipoprotein1e-23109
NC_011205:2621415:262492826249282625683756Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lipoprotein, VacJ family1e-23109
NC_011274:2483038:248869724886972489452756Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91VacJ lipoprotein1e-23109
NC_011294:2492168:249782624978262498581756Salmonella enterica subsp. enterica serovar Enteritidis strVacJ lipoprotein1e-23109
NC_016831:531404:545425545425546180756Salmonella enterica subsp. enterica serovar Gallinarum/pullorumVacJ lipoprotein1e-23109
NC_016832:531208:545179545179545934756Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,phospholipid-binding lipoprotein mlaA1e-23109
NC_012125:1360593:137569613756961376451756Salmonella enterica subsp. enterica serovar Paratyphi C strainVacJ lipoprotein2e-23108
NC_017057:83415:104427104427105182756Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeVacJ lipoprotein5e-22104
NC_017056:86663:104310104310105065756Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeVacJ lipoprotein7e-22103
NC_017050:83406:104300104300105055756Rickettsia prowazekii str. Katsinyian chromosome, complete genomeVacJ lipoprotein7e-22103
NC_000963:83408:104302104302105057756Rickettsia prowazekii str. Madrid E, complete genomeVACJ LIPOPROTEIN PRECURSOR (vacJ)7e-22103
NC_015594:214500:236454236454237356903Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeVacJ family lipoprotein1e-1893.2