Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:1360593 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136059313618461254hypothetical proteinBLASTP
13619001362076177hypothetical proteinBLASTP
136252813639461419DNA stabilization proteinQuickGO ontologyBLASTP
13639501364588639Packaged DNA stabilization protein gp26QuickGO ontologyBLASTP
13645881365043456Protein gp14QuickGO ontologyBLASTP
13650461365741696hypothetical proteinBLASTP
136575113670461296hypothetical proteinBLASTP
136704613690431998hypothetical proteinBLASTP
13694961369744249regulatory proteinQuickGO ontologyBLASTP
136988013716311752hypothetical proteinBLASTP
137169513729481254hypothetical proteinBLASTP
13729841373103120integraseQuickGO ontologyBLASTP
13744661375407942hypothetical proteinBLASTP
13756961376451756VacJ lipoproteinQuickGO ontologyBLASTP
137651213778251314long-chain fatty acid outer membrane transporterQuickGO ontologyBLASTP
13781901378474285hypothetical proteinBLASTP
1378652137996213113-ketoacyl-CoA thiolaseQuickGO ontologyBLASTP
137998313821092127multifunctional fatty acid oxidation complex subunit alphaQuickGO ontologyBLASTP
13823181382803486phosphohistidine phosphataseQuickGO ontologyBLASTP
13829031383454552hypothetical proteinBLASTP
13836201384552933N5-glutamine S-adenosyl-L-methionine-dependent methyltransferaseQuickGO ontologyBLASTP
138458513856731089chorismate synthaseQuickGO ontologyBLASTP
13856771386501825penicillin-insensitive murein endopeptidaseQuickGO ontologyBLASTP
13865011387310810hypothetical proteinBLASTP
13873101387858549cytoplasmic proteinQuickGO ontologyBLASTP