Pre_GI Gene

Some Help

Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:2489000 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24890082489292285hypothetical proteinBLASTP
248965824910041347long-chain fatty acid outer membrane transporterQuickGO ontologyBLASTP
24910622491817756lipoproteinQuickGO ontologyBLASTP
24918432492013171hypothetical proteinBLASTP
24921112493043933hypothetical proteinBLASTP
249335524945121158prophage CPS-53 integrase CPS-53 KpLE1 prophageQuickGO ontologyBLASTP
249579424987392946Endo-alpha-sialidase phage head proteinQuickGO ontologyBLASTP
24988402499808969Antirepressor protein antQuickGO ontologyBLASTP
25002002500490291phage regulatory proteinQuickGO ontologyBLASTP
25004902501026537Clp proteaseQuickGO ontologyBLASTP
25010752501524450hypothetical proteinBLASTP
25015332502129597hypothetical proteinBLASTP
25022752502625351hypothetical proteinBLASTP
250264325046582016DNA transfer protein from bacteriophageQuickGO ontologyBLASTP
250465525061061452DNA transfer proteinQuickGO ontologyBLASTP
25061172506809693DNA transfer proteinQuickGO ontologyBLASTP
25068122507267456head assembly proteinQuickGO ontologyBLASTP
25072672508070804Packaged DNA stabilization protein from phageQuickGO ontologyBLASTP
250796825093861419Packaged DNA stabilization protein from phageQuickGO ontologyBLASTP
25093962509857462DNA stabilization protein from phageQuickGO ontologyBLASTP
25098382510065228hypothetical proteinBLASTP
251006825113211254Coat protein from phageQuickGO ontologyBLASTP
25113402512233894bacteriophage proteinQuickGO ontologyBLASTP