Pre_GI Gene

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Host: CU928145 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CU928145:2655989 Escherichia coli 55989 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
265598926581332145fused enoyl-CoA hydratase and epimerase and isomerase 3-hydroxyacyl-CoA dehydrogenaseQuickGO ontologyBLASTP
265813326594431311beta-ketoacyl-CoA thiolase anaerobic subunitQuickGO ontologyBLASTP
26596232659907285conserved hypothetical proteinBLASTP
266027326616191347long-chain fatty acid outer membrane transporterQuickGO ontologyBLASTP
266198526630431059conserved hypothetical proteinBLASTP
26632252663980756putative lipoproteinQuickGO ontologyBLASTP
26640062664176171conserved hypothetical proteinBLASTP
26642742665206933conserved hypothetical protein putative inner membrane proteinQuickGO ontologyBLASTP
2665282266535675tRNA-ArgQuickGO ontology
266551826666751158putative prophage CPS-53 integrase CPS-53 KpLE1 prophageQuickGO ontologyBLASTP
266688426688061923hypothetical protein putative membrane protein predicted 10 transmembrane domains Acyltransferase activity domainQuickGO ontologyBLASTP
266887726708561980hypothetical protein putative head-binding domainQuickGO ontologyBLASTP
26709082671246339putative regulatory protein mnt modular proteinQuickGO ontologyBLASTP
26714822672261780hypothetical protein from phageQuickGO ontologyBLASTP
26722992673009711hypothetical protein from phageQuickGO ontologyBLASTP
26729992673187189putative transcriptional repressor arc modular proteinQuickGO ontologyBLASTP
26732842673604321putative regulator protein Arc-like DNA binding domainQuickGO ontologyBLASTP
26736882673882195conserved hypothetical proteinBLASTP
26738962674261366conserved hypothetical proteinBLASTP
267451626766392124putative DNA transfer protein fragmentQuickGO ontologyBLASTP
267662426779671344DNA transfer protein gp20QuickGO ontologyBLASTP
26779782678670693DNA transfer proteinQuickGO ontologyBLASTP
26786732679131459Head assembly proteinQuickGO ontologyBLASTP
26791282679976849Packaged DNA stabilization protein gp26QuickGO ontologyBLASTP
267997626813941419Packaged DNA stabilization protein from phageQuickGO ontologyBLASTP
26814032681885483putative packaged DNA stabilization protein p27QuickGO ontologyBLASTP
26818602682045186conserved hypothetical protein from phageQuickGO ontologyBLASTP
268208826833591272Major head protein p24 Major coat proteinQuickGO ontologyBLASTP
26833712684255885putative scaffold proteinQuickGO ontologyBLASTP
268426926864672199portal protein p19QuickGO ontologyBLASTP
268639826878101413Terminase large subunitQuickGO ontologyBLASTP
26878072688232426putative terminase small subunitQuickGO ontologyBLASTP